ENSMUSG00000072479


Mus musculus

Features
Gene ID: ENSMUSG00000072479
  
Biological name :Xlr5b
  
Synonyms : X-linked lymphocyte-regulated 5B / Xlr5b
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: X
Strand: 1
Band: A7.3
Gene start: 73148796
Gene end: 73158872
  
Corresponding Affymetrix probe sets: 10605018 (MoGene1.0st)   10605044 (MoGene1.0st)   1422933_at (Mouse Genome 430 2.0 Array)   1443483_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000120174
Ensembl peptide - ENSMUSP00000110163
Ensembl peptide - ENSMUSP00000110164
NCBI entrez gene - 627081     See in Manteia.
MGI - MGI:3574109
RefSeq - XM_006528225
RefSeq - XM_006528222
RefSeq - XM_006528223
RefSeq - XM_006528224
RefSeq - NM_001111293
RefSeq - XM_006528218
RefSeq - XM_006528219
RefSeq - XM_006528220
RefSeq - XM_006528221
RefSeq Peptide - NP_001104763
swissprot - A2BI50
swissprot - A2BI49
Ensembl - ENSMUSG00000072479
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sycp3ENSDARG00000013438Danio rerio
 SYCP3ENSGALG00000012766Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Xlr5a / X-linked lymphocyte-regulated 5AENSMUSG0000005832896
Xlr5c / X-linked lymphocyte-regulated 5CENSMUSG0000006776472
Sycp3 / synaptonemal complex protein 3 / Q8IZU3*ENSMUSG0000002005928
Gm14692ENSMUSG0000007957728
Gm1140ENSMUSG0000007957828
Gm28919ENSMUSG0000010124316
1700013H16Rik / RIKEN cDNA 1700013H16 geneENSMUSG0000005472715
Gm20736ENSMUSG0000009399315
Gm29554ENSMUSG0000010023115
Gm28510ENSMUSG0000010139615
3830403N18Rik / RIKEN cDNA 3830403N18 geneENSMUSG0000003112514
Xlr / P05531 / X-linked lymphocyte-regulatedENSMUSG0000005462614
Gm773 / predicted gene 773ENSMUSG0000007317714
Gm21865ENSMUSG0000009389514
Gm21477ENSMUSG0000009439914
Gm20931ENSMUSG0000009457014
Gm20888ENSMUSG0000009461614
Gm21650ENSMUSG0000009464714
Gm20916ENSMUSG0000009474614
Gm21518ENSMUSG0000009482114


Protein motifs (from Interpro)
Interpro ID Name
 IPR006888  XLR/SYCP3/FAM9 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051321 meiotic cell cycle IBA
 cellular_componentGO:0000800 lateral element IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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