ENSMUSG00000058558


Mus musculus

Features
Gene ID: ENSMUSG00000058558
  
Biological name :Rpl5
  
Synonyms : P47962 / ribosomal protein L5 / Rpl5
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 5
Strand: 1
Band: F
Gene start: 107900502
Gene end: 107909005
  
Corresponding Affymetrix probe sets: 10344931 (MoGene1.0st)   10459669 (MoGene1.0st)   10477581 (MoGene1.0st)   10523893 (MoGene1.0st)   10523901 (MoGene1.0st)   10567103 (MoGene1.0st)   1423665_a_at (Mouse Genome 430 2.0 Array)   1423666_s_at (Mouse Genome 430 2.0 Array)   1451077_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000080854
Ensembl peptide - ENSMUSP00000123474
NCBI entrez gene - 100503670     See in Manteia.
MGI - MGI:102854
RefSeq - XM_006534684
RefSeq - NM_016980
RefSeq Peptide - NP_058676
swissprot - P47962
swissprot - Q58EU6
swissprot - D3YYV8
Ensembl - ENSMUSG00000058558
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl5aENSDARG00000020197Danio rerio
 rpl5bENSDARG00000015862Danio rerio
 RPL5ENSGALG00000005922Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005485  Ribosomal protein L5 eukaryotic/L18 archaeal
 IPR025607  Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000027 ribosomal large subunit assembly ISO
 biological_processGO:0006364 rRNA processing ISO
 biological_processGO:0006412 translation IEA
 biological_processGO:0010628 positive regulation of gene expression ISO
 biological_processGO:0010922 positive regulation of phosphatase activity IEA
 biological_processGO:0042273 ribosomal large subunit biogenesis ISO
 biological_processGO:0045727 positive regulation of translation ISO
 biological_processGO:0050821 protein stabilization ISO
 biological_processGO:0071241 cellular response to inorganic substance IEA
 biological_processGO:1901796 regulation of signal transduction by p53 class mediator ISO
 biological_processGO:1904667 negative regulation of ubiquitin protein ligase activity ISO
 biological_processGO:1905017 positive regulation of isoleucine-tRNA ligase activity IEA
 biological_processGO:1905020 positive regulation of methionine-tRNA ligase activity IEA
 biological_processGO:1905023 positive regulation of threonine-tRNA ligase activity IEA
 biological_processGO:2000059 negative regulation of ubiquitin-dependent protein catabolic process ISO
 biological_processGO:2000435 negative regulation of protein neddylation ISO
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005730 nucleolus ISS
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005783 endoplasmic reticulum ISO
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0017101 aminoacyl-tRNA synthetase multienzyme complex IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IEA
 cellular_componentGO:0022626 cytosolic ribosome IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IEA
 molecular_functionGO:0003730 mRNA 3"-UTR binding ISO
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008097 5S rRNA binding IEA
 molecular_functionGO:0019843 rRNA binding IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding ISO
 molecular_functionGO:0048027 mRNA 5"-UTR binding ISO
 molecular_functionGO:1990948 ubiquitin ligase inhibitor activity ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr