ENSMUSG00000061991


Mus musculus

Features
Gene ID: ENSMUSG00000061991
  
Biological name :Hist1h2af
  
Synonyms : Hist1h2af / Histone H2A type 1-F / Q8CGP5
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 13
Strand: 1
Band: A3.1
Gene start: 23533906
Gene end: 23534304
  
Corresponding Affymetrix probe sets: 10403938 (MoGene1.0st)   10403955 (MoGene1.0st)   10404026 (MoGene1.0st)   10404045 (MoGene1.0st)   10408072 (MoGene1.0st)   10408085 (MoGene1.0st)   10408094 (MoGene1.0st)   10408111 (MoGene1.0st)   10408118 (MoGene1.0st)   10500324 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000072989
NCBI entrez gene - 319173     See in Manteia.
MGI - MGI:2448309
RefSeq - NM_175661
RefSeq Peptide - NP_783592
swissprot - Q8CGP5
Ensembl - ENSMUSG00000061991
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8CGP7 / Hist1h2ak / Histone H2A type 1-K ENSMUSG0000006302198
Q8BFU2 / Hist3h2a / Histone H2A type 3 / Q7L7L0* / histone cluster 3 H2A*ENSMUSG0000007885198
Q6GSS7 / Hist2h2aa2 / Histone H2A type 2-A ENSMUSG0000006395496
Q6GSS7 / Hist2h2aa1 / Histone H2A type 2-A / Q16777* / Q6FI13* / HIST2H2AC* / HIST2H2AA4* / histone cluster 2 H2A family member c* / histone cluster 2 H2A family member a4*ENSMUSG0000006422096
Q64523 / Hist2h2ac / Histone H2A type 2-C ENSMUSG0000006885595
Q64522 / Hist2h2ab / Histone H2A type 2-B / Q8IUE6* / histone cluster 2 H2A family member b*ENSMUSG0000006368993
H2afj / Q8R1M2 / Histone H2A.J / Q9BTM1* / H2A histone family member J*ENSMUSG0000006003292
H2afx / P27661 / Histone H2AX / P16104* / H2A histone family member X*ENSMUSG0000004993289
Hist1h2aa / histone cluster 1, H2aa / Q96QV6* / histone cluster 1 H2A family member a*ENSMUSG0000006008188
H2afy2 / Q8CCK0 / Core histone macro-H2A.2 / Q9P0M6* / H2A histone family member Y2*ENSMUSG0000002008664
H2afy / Q9QZQ8 / Core histone macro-H2A.1 / O75367* / H2A histone family member Y*ENSMUSG0000001593763
H2afb1 / H2AFB3* / P0C5Z0* / H2AFB2* / P0C5Y9* / H2A histone family member B3* / H2A histone family member B1* / H2A histone family member B2*ENSMUSG0000006744131
H2afb3 / H2AFB2* / P0C5Z0* / H2AFB1* / P0C5Y9* / H2A histone family member B3* / H2A histone family member B1* / H2A histone family member B2*ENSMUSG0000008361631
H2afb2 / H2AFB3* / P0C5Z0* / H2AFB1* / P0C5Y9* / H2A histone family member B3* / H2A histone family member B1* / H2A histone family member B2*ENSMUSG0000008248228


Protein motifs (from Interpro)
Interpro ID Name
 IPR002119  Histone H2A
 IPR007125  Histone H2A/H2B/H3
 IPR009072  Histone-fold
 IPR032454  Histone H2A, C-terminal domain
 IPR032458  Histone H2A conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006342 chromatin silencing IBA
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0000790 nuclear chromatin IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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