ENSMUSG00000063052


Mus musculus

Features
Gene ID: ENSMUSG00000063052
  
Biological name :Lrrc40
  
Synonyms : leucine-rich repeat-containing protein 40 isoform b / Lrrc40
  
Possible biological names infered from orthology : leucine rich repeat containing 40 / Q9H9A6
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: H4
Gene start: 158036662
Gene end: 158068487
  
Corresponding Affymetrix probe sets: 10497105 (MoGene1.0st)   1448720_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000117093
Ensembl peptide - ENSMUSP00000116475
Ensembl peptide - ENSMUSP00000121417
Ensembl peptide - ENSMUSP00000143518
Ensembl peptide - ENSMUSP00000121905
Ensembl peptide - ENSMUSP00000071956
NCBI entrez gene - 67144     See in Manteia.
MGI - MGI:1914394
RefSeq - XM_006501927
RefSeq - NM_001289524
RefSeq - NM_001289525
RefSeq - NM_024194
RefSeq - XM_006501925
RefSeq Peptide - NP_001276454
RefSeq Peptide - NP_001276453
RefSeq Peptide - NP_077156
swissprot - D6RFC5
swissprot - F6RDA7
swissprot - A0A0R4J0W6
swissprot - F6RGS7
swissprot - A0A0G2JGC9
swissprot - D6RHB1
Ensembl - ENSMUSG00000063052
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lrrc40ENSDARG00000017708Danio rerio
 LRRC40ENSGALG00000011301Gallus gallus
 LRRC40ENSG00000066557Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lrrd1 / Q8C0R9 / Leucine-rich repeat and death domain-containing protein 1 / A4D1F6* / leucine rich repeats and death domain containing 1*ENSMUSG0000004036726
Mfhas1 / Q3V1N1 / Malignant fibrous histiocytoma-amplified sequence 1 homolog / Q9Y4C4* / malignant fibrous histiocytoma amplified sequence 1*ENSMUSG0000007005623
Erbin / Q80TH2 / Q96RT1* / erbb2 interacting protein*ENSMUSG0000002170922
Shoc2 / O88520 / Mus musculus soc-2 (suppressor of clear) homolog (C. elegans) (Shoc2), transcript variant 3, mRNA. / Q9UQ13* / SHOC2, leucine rich repeat scaffold protein*ENSMUSG0000002497622
Lrrc7 / leucine rich repeat containing 7 / Q96NW7*ENSMUSG0000002817622
Scrib / Q80U72 / scribbled planar cell polarity protein / Q14160*ENSMUSG0000002256821
A6H6A4 / Lrriq4 / Leucine-rich repeat and IQ domain-containing protein 4 / A6NIV6* / leucine rich repeats and IQ motif containing 4*ENSMUSG0000002770320
Lrrc1 / Q80VQ1 / Leucine-rich repeat-containing protein 1 / Q9BTT6* / leucine rich repeat containing 1*ENSMUSG0000003235219
Lrrc30 / leucine rich repeat containing 30 / A6NM36*ENSMUSG0000007337515
Lrrc10b / leucine rich repeat containing 10B / A6NIK2*ENSMUSG0000009029110
Lrrc10 / Q8K3W2 / Leucine-rich repeat-containing protein 10 / Q5BKY1* / leucine rich repeat containing 10*ENSMUSG000000601879


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR025875  Leucine rich repeat 4
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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