ENSMUSG00000075600


Mus musculus

Features
Gene ID: ENSMUSG00000075600
  
Biological name :Zc3h3
  
Synonyms : Q8CHP0 / Zc3h3 / zinc finger CCCH type containing 3
  
Possible biological names infered from orthology : Q8IXZ2
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: D3
Gene start: 75754430
Gene end: 75841915
  
Corresponding Affymetrix probe sets: 10429623 (MoGene1.0st)   10559392 (MoGene1.0st)   1435949_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000098106
NCBI entrez gene - 223642     See in Manteia.
MGI - MGI:2663721
RefSeq - XM_017316551
RefSeq - NM_172121
RefSeq - XM_011245566
RefSeq Peptide - NP_742119
swissprot - Q8CHP0
swissprot - Q3UUL4
Ensembl - ENSMUSG00000075600
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zc3h3ENSDARG00000090751Danio rerio
 ZC3H3ENSGALG00000043265Gallus gallus
 ZC3H3ENSG00000014164Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cpsf4l / cleavage and polyadenylation specific factor 4-like / A6NMK7*ENSMUSG000000187277
Cpsf4 / Q8BQZ5 / Cleavage and polyadenylation specificity factor subunit 4 / O95639* / cleavage and polyadenylation specific factor 4*ENSMUSG000000296256


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR036855  Zinc finger, CCCH-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006378 mRNA polyadenylation ISS
 biological_processGO:0010793 regulation of mRNA export from nucleus ISS
 biological_processGO:0016973 poly(A)+ mRNA export from nucleus IBA
 biological_processGO:0031124 mRNA 3"-end processing IDA
 biological_processGO:0032927 positive regulation of activin receptor signaling pathway IGI
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005847 mRNA cleavage and polyadenylation specificity factor complex IDA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0004521 endoribonuclease activity IBA
 molecular_functionGO:0046332 SMAD binding IPI
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070412 R-SMAD binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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