ENSMUSG00000078763


Mus musculus

Features
Gene ID: ENSMUSG00000078763
  
Biological name :Slfn1
  
Synonyms : schlafen 1 / Slfn1
  
Possible biological names infered from orthology : Q6IEE8 / Q8IYM2 / schlafen family member 12 / schlafen family member 12 like / SLFN12 / SLFN12L
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: C
Gene start: 83116849
Gene end: 83122670
  
Corresponding Affymetrix probe sets: 10379633 (MoGene1.0st)   1418612_at (Mouse Genome 430 2.0 Array)   1447614_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000047782
NCBI entrez gene - 20555     See in Manteia.
MGI - MGI:1313259
RefSeq - NM_011407
RefSeq Peptide - NP_035537
swissprot - Q9Z0I7
Ensembl - ENSMUSG00000078763
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6IEE8ENSG00000205045Homo sapiens
 Q8IYM2ENSG00000172123Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Slfn2 / schlafen 2 / Q6IEE8* / Q8IYM2* / SLFN12* / SLFN12L* / schlafen family member 12* / schlafen family member 12 like*ENSMUSG0000007262051
Slfn4 / schlafen 4 / Q6IEE8* / Q8IYM2* / SLFN12* / SLFN12L* / schlafen family member 12* / schlafen family member 12 like*ENSMUSG0000000020448
Slfn3 / schlafen 3 / Q6IEE8* / Q8IYM2* / SLFN12* / SLFN12L* / schlafen family member 12* / schlafen family member 12 like*ENSMUSG0000001898645
Slfn14 / V9GXG1 / Protein SLFN14 C-terminally truncated SLFN14 endoribonuclease / P0C7P3* / schlafen family member 14*ENSMUSG0000008210137
Slfn9 / Q7Z7L1* / SLFN11* / SLFN13* / Q68D06* / schlafen family member 11* / schlafen family member 13*ENSMUSG0000006979335
Slfn8 / schlafen 8 / SLFN13* / Q68D06* / Q7Z7L1* / SLFN11* / schlafen family member 13* / schlafen family member 11*ENSMUSG0000003520833
Slfn5 / Q8CBA2 / Schlafen family member 5 / Q08AF3*ENSMUSG0000005440432


Protein motifs (from Interpro)
Interpro ID Name
 IPR007421  Schlafen, AAA domain
 IPR029684  Schlafen family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0001933 negative regulation of protein phosphorylation IDA
 biological_processGO:0007050 cell cycle arrest IDA
 biological_processGO:0008285 negative regulation of cell proliferation IDA
 biological_processGO:0042130 negative regulation of T cell proliferation IDA
 biological_processGO:1900477 negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter IDA
 biological_processGO:2000134 negative regulation of G1/S transition of mitotic cell cycle IGI
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002059 abnormal seminal gland morphology "anomalous structure of one of the two folded, sac shaped, glands that is a diverticulum of the ductus deferens " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Scribtm1b(NCOM)Mfgc/Scribtm1b(NCOM)Mfgc
Genetic Background: C57BL/6N-Scribtm1a(NCOM)Mfgc/Tcp

 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Dlk1tm1Hsul/Dlk1+
Genetic Background: involves: 129 * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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