1280


Homo sapiens (NCBI)

Features
Gene ID: 1280
  
Biological name :
  
Synonyms : ANFH|AOM|COL11A3|SEDC|STL1 / COL2A1 / collagen type II alpha 1 chain
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 213492_at (Human Genome U133 Plus 2.0 Array)   217404_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - XP_016874320.1
RefSeq - 1034578032
RefSeq - 1034578034
RefSeq - 1034578036
RefSeq - 111118974
RefSeq - 111118976
RefSeq - NC_000012.12
RefSeq - NG_008072.1
RefSeq - NP_001835.3
RefSeq - NP_149162.2
RefSeq - XP_016874317.1
RefSeq - XP_016874318.1
RefSeq - XP_016874319.1
RefSeq - 1034578030
RefSeq - NM_001844.4
RefSeq - NM_033150.2
RefSeq - XM_017018830.1
RefSeq - XM_017018831.2
RefSeq - XM_017018828.1
RefSeq - XM_017018829.1
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000139219 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IMP
 biological_processGO:0001502 cartilage condensation IEA
 biological_processGO:0001894 tissue homeostasis IEA
 biological_processGO:0001958 endochondral ossification IEA
 biological_processGO:0002062 chondrocyte differentiation IEA
 biological_processGO:0003007 heart morphogenesis IEA
 biological_processGO:0006029 proteoglycan metabolic process IEA
 biological_processGO:0007417 central nervous system development IEA
 biological_processGO:0007601 visual perception IMP
 biological_processGO:0007605 sensory perception of sound IMP
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0030198 extracellular matrix organization TAS
 biological_processGO:0030199 collagen fibril organization IMP
 biological_processGO:0030903 notochord development IEA
 biological_processGO:0042472 inner ear morphogenesis IEA
 biological_processGO:0050776 regulation of immune response TAS
 biological_processGO:0051216 cartilage development TAS
 biological_processGO:0060021 roof of mouth development IEA
 biological_processGO:0060174 limb bud formation IEA
 biological_processGO:0060272 embryonic skeletal joint morphogenesis IMP
 biological_processGO:0060351 cartilage development involved in endochondral bone morphogenesis IEA
 biological_processGO:0071599 otic vesicle development IEA
 biological_processGO:0071773 cellular response to BMP stimulus IEA
 biological_processGO:0097065 anterior head development IEA
 biological_processGO:2001240 negative regulation of extrinsic apoptotic signaling pathway in absence of ligand IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005581 collagen trimer IBA
 cellular_componentGO:0005585 collagen type II trimer IDA
 cellular_componentGO:0005604 basement membrane IEA
 cellular_componentGO:0005615 extracellular space IMP
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 cellular_componentGO:0031012 extracellular matrix HDA
 cellular_componentGO:0062023 collagen-containing extracellular matrix HDA
 molecular_functionGO:0005201 extracellular matrix structural constituent IBA
 molecular_functionGO:0030020 extracellular matrix structural constituent conferring tensile strength IC
 molecular_functionGO:0042289 MHC class II protein binding IPI
 molecular_functionGO:0042802 identical protein binding NAS
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0048407 platelet-derived growth factor binding IDA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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