ENSG00000139219


Homo sapiens

Features
Gene ID: ENSG00000139219
  
Biological name :COL2A1
  
Synonyms : COL2A1 / collagen type II alpha 1 chain / P02458
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.11
Gene start: 47972965
Gene end: 48004554
  
Corresponding Affymetrix probe sets: 213492_at (Human Genome U133 Plus 2.0 Array)   217404_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000338213
Ensembl peptide - ENSP00000369889
NCBI entrez gene - 1280     See in Manteia.
OMIM - 120140
RefSeq - XM_017018831
RefSeq - NM_001844
RefSeq - NM_033150
RefSeq - XM_017018828
RefSeq - XM_017018829
RefSeq - XM_017018830
RefSeq Peptide - NP_149162
RefSeq Peptide - NP_001835
swissprot - P02458
Ensembl - ENSG00000139219
  
Related genetic diseases (OMIM): 200610 - Achondrogenesis, type II or hypochondrogenesis, 200610
  608805 - Avascular necrosis of the femoral head, 608805
  609162 - Czech dysplasia, 609162
  132450 - Epiphyseal dysplasia, multiple, with myopia and deafness, 132450
  156550 - Kniest dysplasia, 156550
  150600 - Legg-Calve-Perthes disease, 150600
  604864 - Osteoarthritis with mild chondrodysplasia, 604864
  151210 - Platyspondylic skeletal dysplasia, Torrance type, 151210
  183900 - SED congenita, 183900
  184250 - SMED Strudwick type, 184250
  616583 - Spondyloepiphyseal dysplasia, Stanescu type, 616583
  271700 - Spondyloperipheral dysplasia, 271700
  609508 - Stickler sydrome, type I, nonsyndromic ocular, 609508
  108300 - Stickler syndrome, type I, 108300
  120140 - Vitreoretinopathy with phalangeal epiphyseal dysplasia
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 col2a1aENSDARG00000069093Danio rerio
 col2a1bENSDARG00000011407Danio rerio
 Col2a1ENSMUSG00000022483Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
COL1A1 / P02452 / collagen type I alpha 1 chainENSG0000010882171
COL5A2 / P05997 / collagen type V alpha 2 chainENSG0000020426265
COL3A1 / P02461 / collagen type III alpha 1 chainENSG0000016854261
COL1A2 / P08123 / collagen type I alpha 2 chainENSG0000016469260
COL5A1 / P20908 / collagen type V alpha 1 chainENSG0000013063547
P12107 / COL11A1 / collagen type XI alpha 1 chainENSG0000006071846
P13942 / COL11A2 / collagen type XI alpha 2 chainENSG0000020424844
COL5A3 / P25940 / collagen type V alpha 3 chainENSG0000008057343
Q8IZC6 / COL27A1 / collagen type XXVII alpha 1 chainENSG0000019673939
Q17RW2 / COL24A1 / collagen type XXIV alpha 1 chainENSG0000017150237


Protein motifs (from Interpro)
Interpro ID Name
 IPR000885  Fibrillar collagen, C-terminal
 IPR001007  VWFC domain
 IPR008160  Collagen triple helix repeat
 IPR014716  Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1
 IPR016133  Insect cysteine-rich antifreeze protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IMP
 biological_processGO:0001502 cartilage condensation IEA
 biological_processGO:0001503 ossification IEA
 biological_processGO:0001894 tissue homeostasis IEA
 biological_processGO:0001958 endochondral ossification IEA
 biological_processGO:0002062 chondrocyte differentiation IEA
 biological_processGO:0003007 heart morphogenesis IEA
 biological_processGO:0006029 proteoglycan metabolic process IEA
 biological_processGO:0007417 central nervous system development IEA
 biological_processGO:0007601 visual perception IMP
 biological_processGO:0007605 sensory perception of sound IMP
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0030198 extracellular matrix organization TAS
 biological_processGO:0030199 collagen fibril organization IMP
 biological_processGO:0030574 collagen catabolic process TAS
 biological_processGO:0030903 notochord development IEA
 biological_processGO:0035108 limb morphogenesis IEA
 biological_processGO:0042472 inner ear morphogenesis IEA
 biological_processGO:0048705 skeletal system morphogenesis IEA
 biological_processGO:0048839 inner ear development IEA
 biological_processGO:0050776 regulation of immune response TAS
 biological_processGO:0051216 cartilage development TAS
 biological_processGO:0060021 roof of mouth development IEA
 biological_processGO:0060174 limb bud formation IEA
 biological_processGO:0060272 embryonic skeletal joint morphogenesis IMP
 biological_processGO:0060348 bone development IEA
 biological_processGO:0060351 cartilage development involved in endochondral bone morphogenesis IEA
 biological_processGO:0071599 otic vesicle development IEA
 biological_processGO:0071773 cellular response to BMP stimulus IEA
 biological_processGO:0097065 anterior head development IEA
 biological_processGO:2001240 negative regulation of extrinsic apoptotic signaling pathway in absence of ligand IEA
 cellular_componentGO:0005576 extracellular region IDA
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005585 collagen type II trimer IDA
 cellular_componentGO:0005604 basement membrane IEA
 cellular_componentGO:0005615 extracellular space IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 cellular_componentGO:0031012 extracellular matrix IDA
 molecular_functionGO:0005201 extracellular matrix structural constituent IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0030020 extracellular matrix structural constituent conferring tensile strength IC
 molecular_functionGO:0042289 MHC class II protein binding IPI
 molecular_functionGO:0042802 identical protein binding NAS
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0048407 platelet-derived growth factor binding IDA


Pathways (from Reactome)
Pathway description
Collagen degradation
Extracellular matrix organization
Collagen biosynthesis and modifying enzymes
Signaling by PDGF
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
Assembly of collagen fibrils and other multimeric structures
Integrin cell surface interactions
Non-integrin membrane-ECM interactions
ECM proteoglycans
NCAM1 interactions
MET activates PTK2 signaling
Collagen chain trimerization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000023 Inguinal hernia 
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 HP:0000160 Microstomia "The presence of an abnormally small `mouth` (FMA:49184)." [HPO:curators]
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 HP:0000162 Glossoptosis 
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 HP:0000164 Abnormality of the teeth "Any abnormality of the primary (deciduous) or permanent teeth." [HPO:curators]
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000201 Pierre-Robin sequence 
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 HP:0000211 Trismus "Limitation in the ability to open the mouth." [HPO:curators]
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
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 HP:0000280 Coarse facial features 
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 HP:0000311 Round face "An unusually round appearance of the face." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000327 Hypoplasia of the maxilla "Underdevelopment of the `Maxilla` (FMA:9711)." [HPO:probinson]
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 HP:0000337 Broad forehead "Abnormally large side-to-side distance of the forehead." [HPO:curators]
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 HP:0000339 Pugilistic facies  
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 HP:0000343 Long philtrum 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000403 Recurrent otitis media 
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 HP:0000405 Hearing loss, conductive 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000410 Mixed hearing loss 
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 HP:0000414 Bulbous nose 
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000470 Short neck 
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 HP:0000474 Excess nuchal skin 
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 HP:0000476 Cystic hygroma of the neck "A cystic lymphatic lesion of the neck." [HPO:curators]
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 HP:0000488 Retinopathy 
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 HP:0000501 Glaucoma "Glaucoma refers loss of retinal ganglion cells in a characteristic pattern of optic neuropathy usually associated with increased intraocular pressure." [HPO:curators]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000520 Proptosis 
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 HP:0000541 Detached retina 
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 HP:0000545 Myopia 
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 HP:0000572 Visual loss 
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 HP:0000618 Blindness 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000655 Vitreoretinal degeneration 
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 HP:0000750 Impaired language development 
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 HP:0000766 Abnormality of the sternum 
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 HP:0000767 Pectus excavatum "A defect of the chest wall characterized by a depression of the sternum, giving the chest ("pectus") a caved-in ("excavatum") appearance." [HPO:curators]
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 HP:0000768 Pectus carinatum "A deformity of the chest caused by overgrowth of the ribs and characterized by protrusion of the sternum." [HPO:curators]
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 HP:0000773 Short ribs 
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 HP:0000774 Narrow chest 
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 HP:0000882 Hypoplastic scapulae 
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 HP:0000883 Thin ribs 
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 HP:0000888 Short, horizontal ribs 
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 HP:0000907 Anterior rib cupping 
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 HP:0000926 Platyspondyly 
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 HP:0000944 Abnormality of the metaphyses 
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 HP:0000946 Hypoplastic ilia 
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 HP:0000947 Dumbbell-shaped long bones 
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 HP:0000969 Edema "An abnormal accumulation of fluid beneath the skin, or in one or more cavities of the body. Edema may be related to one or more of the following factors: 1) increased capillary hydrostatic pressure, 2) decreased osmotic pressure of plasma, 3) decreased tissue tension and lymphatic drainage, 4) increased osmotic pressure of tissue fluids, and 5) increased capillary permeability." [HPO:curators]
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 HP:0001083 Ectopia lentis 
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 HP:0001156 Brachydactyly 
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 HP:0001162 Postaxial polydactyly (hands) "Supernumerary digits located at the ulnar side of the hand." [HPO:curators]
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 HP:0001166 Arachnodactyly "Abnormally long and slender fingers ("spider fingers")." [HPO:curators]
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 HP:0001169 Broad hands 
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 HP:0001191 Abnormality of the carpal bones "An abnormality affecting the carpal bones of the wrist (scaphoid, lunate, triquetral, pisiform, trapezium, trapezoid, capitate, hamate)." [HPO:curators]
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 HP:0001248 Short tubular bones (hand) 
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 HP:0001249 Mental retardation 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001270 Motor retardation 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001373 Joint dislocation "Displacement or malalignment of joints." [HPO:curators]
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 HP:0001376 Decreased mobility of joints 
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 HP:0001377 Limited elbow extension 
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 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
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 HP:0001507 Growth abnormality 
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 HP:0001519 Dolichostenomelia "A tall and slim body build with increased arm span to height ratio (>1.05) and a reduced upper-to-lower segment ratio (<0.85), i.e., unusually long arms and legs. The extremities as well as the hands and feet are unusually slim." [HPO:curators]
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 HP:0001537 Umbilical hernia "Protrusion of abdominal contents through a defect in the abdominal wall musculature around the umbilicus. Skin and subcutaneous tissue overlie the defect." [HPO:curators]
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 HP:0001538 Protuberant abdomen "A thrusting or bulging out of the abdomen." [HPO:curators]
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 HP:0001552 Barrel-shaped chest 
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 HP:0001561 Polyhydramnios 
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 HP:0001634 Mitral valve prolapse 
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 HP:0001636 Tetralogy of Fallot "A congenital cardiac malformation comprising pulmonary stenosis, overriding aorta, ventricular septum defect, and right ventricular hypertrophy. The diagnosis of TOF is made if at least three of the four above mentioned features are present." [HPO:curators]
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 HP:0001760 Abnormality of the feet "An abnormality of the feet (foot deformity) is a disorder of the foot that can either be congenital or acquired. Such deformities can include hammer toe, club foot deformity, flat feet, pes cavus, Congenital vertical talus (rocker bottom foot) & etc." [HPO:curators]
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0001773 Short, broad feet "Abnormally short and wide feet." [HPO:curators]
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 HP:0001789 Hydrops fetalis 
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 HP:0001798 Anonychia "Total absence of nails." [HPO:curators]
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 HP:0001831 Brachydactyly (feet) 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002089 Pulmonary hypoplasia 
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 HP:0002091 Restrictive lung disease 
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 HP:0002098 Respiratory distress 
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 HP:0002194 Delayed gross motor development 
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 HP:0002318 Cervical myelopathy 
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 HP:0002514 Cerebral calcification "The presence of calcification within brain structures." [HPO:curators]
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 HP:0002515 Waddling gait 
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 HP:0002644 Abnormality of the pelvis "An abnormality of the bony pelvis (pelvic girdle); which is a ring of bones connecting the vertebral column to the femurs." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002651 Spondyloepimetaphyseal dysplasia 
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 HP:0002652 Skeletal dysplasia 
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 HP:0002655 Spondyloepiphyseal dysplasia 
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 HP:0002656 Epiphyseal dysplasia 
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 HP:0002657 Spondylometaphyseal dysplasia 
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 HP:0002663 Late ossifying epiphyses 
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 HP:0002673 Coxa valga "Coxa valga is a deformity of the hip in which the angle between the femoral shaft and the femoral neck is increased compared to age-adjusted values (about 150 degrees in newborns gradually reducing to 120-130 degrees in adults)." [HPO:curators]
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0002751 Kyphoscoliosis 
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 HP:0002757 Recurrent fractures "The repeated occurence of bone fractures (implying an abnormally increased tendency for fracture)." [HPO:curators]
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 HP:0002758 Osteoarthritis 
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 HP:0002761 Generalized joint laxity "Joint hypermobility (ability of a joint to move beyond its normal range of motion) affecting many or all joints of the body." [HPO:curators]
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 HP:0002777 Tracheal stenosis 
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 HP:0002779 Tracheomalacia 
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 HP:0002808 Kyphosis 
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 HP:0002812 Coxa vara 
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 HP:0002827 Dislocated hips 
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 HP:0002829 Arthralgia 
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 HP:0002857 Genu valgum 
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 HP:0002866 Hypoplastic iliac wings 
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 HP:0002868 Narrow iliac wings 
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 HP:0002879 Anisospondyly 
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 HP:0002938 Lumbar hyperlordosis 
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 HP:0002942 Thoracic kyphosis 
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 HP:0002945 Narrow intervertebral spaces 
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 HP:0002970 Genu varum 
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 HP:0002983 Micromelia 
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 HP:0002991 Abnormality of the fibula 
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 HP:0002996 Limited elbow movement 
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 HP:0003015 Metaphyseal flaring "The presence of splayed (i.e.,flared) metaphyseal segments of the long bones." [HPO:curators]
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 HP:0003016 Metaphyseal widening "Abnormal widening of the metaphyseal regions of long bones." [HPO:curators]
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 HP:0003019 Abnormality of the wrist "Abnormalitly of the wrist, the structure connecting the hand and the forearm." [HPO:curators]
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 HP:0003021 Metaphyseal cupping "Metaphyseal cupping refers to an inward bulging of the metaphyseal profile giving the metaphysis a cup-like appearance." [HPO:curators]
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 HP:0003022 Hypoplasia of the ulna "Underdevelopment of the ulna." [HPO:curators]
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 HP:0003025 Irregular metaphyses 
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 HP:0003026 Short long bones 
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 HP:0003037 Enlarged joints 
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 HP:0003040 Arthropathy 
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 HP:0003071 Flattened epiphyses 
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 HP:0003088 Premature osteoarthritis 
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 HP:0003090 Small capital femoral epiphyses 
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 HP:0003097 Short femur "An abnormal shortening of the thigh bones." [HPO:curators]
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 HP:0003173 Hypoplastic pubic bones 
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 HP:0003175 Hypoplastic ischia 
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 HP:0003180 Flat acetabular roofs 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003270 Abdominal distention "Enlargement or distention of the abdomen, which can be a secondary feature associated with a number of conditions such as bowel obstruction." [HPO:curators]
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 HP:0003273 Hip contractures 
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 HP:0003300 Ovoid vertebral bodies 
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 HP:0003301 Irregular vertebral endplates "An irregular surface of the vertebral end plates, which are normally relatively smooth." [HPO:curators]
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 HP:0003307 Hyperlordosis 
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 HP:0003311 Hypoplastic odontoid process 
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 HP:0003320 C1-C2 subluxation "A partial dislocation of the intervertebral joint between the first and second cervical vertebrae." [HPO:curators]
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 HP:0003336 Arrest of endochondral ring structures with persistence of circumferential growth 
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 HP:0003370 Flat capital femoral epiphyses 
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 HP:0003375 Narrow greater sacrosciatic notches "A narrowing of the sacrosciatic notch, i.e., the deep indentation in the posterior border of the hip bone at the point of union of the ilium and ischium." [HPO:curators]
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 HP:0003417 Coronal cleft vertebrae 
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 HP:0003422 Vertebral segmentation defects 
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 HP:0003498 Short stature, disproportionate 
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 HP:0003502 Mild short stature "A mild degree of short stature." [HPO:curators]
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 HP:0003510 Short stature, severe "A severe degree of short stature." [HPO:curators]
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 HP:0003521 Short stature, disproportionate (short trunk) 
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 HP:0003826 Stillborn or neonatal death 
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 HP:0004039 Abnormality of ulnar metaphysis 
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 HP:0004180 Hypoplastic/small distal phalanx of the 3rd finger "Hypoplastic/small distal phalanx of the 3rd (middle) finger." [HPO:curators]
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 HP:0004227 Hypoplastic/small distal phalanx of the 5th finger "Hypoplastic/small distal phalanx of the 5th (little) finger." [HPO:curators]
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 HP:0004279 Hypoplastic hand 
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 HP:0004298 Abnormality of the abdominal wall "The presence of any abnormality affecting the abdominal wall." [HPO:curators]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004327 Abnormality of the vitreous humor 
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 HP:0004565 severe platyspondyly 
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 HP:0004568 Beaking of vertebral bodies 
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 HP:0004591 Disc-like vertebral bodies 
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 HP:0004605 Absent vertebral body mineralization 
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 HP:0004619 lumbar kyphoscoliosis 
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 HP:0004679 Large tarsal bones 
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 HP:0005003 Absent-small capital femoral epiphyses 
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 HP:0005068 absent styloid processes 
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 HP:0005086 Knee osteoarthritis 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005451 Decreased cranial base ossification 
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 HP:0005622 Widened long bones with translucent metaphyseal flaring 
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 HP:0005692 Joint hyperflexibility 
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 HP:0005701 Multiple enchondromatosis 
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 HP:0005716 Lethal skeletal dysplasia 
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 HP:0005743 Abnormal femoral head with degenerative changes 
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 HP:0005863 Type E brachydactyly 
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 HP:0005868 Metaphyseal enchondromatosis 
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 HP:0005930 Abnormality of the epiphyses 
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 HP:0006110 Disproportionately short middle phalanges 
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 HP:0006144 Short proximal and middle phalanges 
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 HP:0006172 Flattened, squared-off epiphyses of tubular bones 
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 HP:0006237 Prominent interphalangeal joints 
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 HP:0006361 Irregular femoral epiphyses 
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 HP:0006406 Club-shaped proximal femurs 
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 HP:0006532 Pneumonia, recurrent episodes 
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 HP:0006703 Aplasia/Hypoplasia of the lungs 
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 HP:0007018 Attention deficit hyperactivity disorder "Attention deficit hyperactivity disorder (ADHD) manifests at age 2-3 years or by first grade at the latest. The main symptoms are distractibility, impulsivity, hyperactivity, and often trouble organizing tasks and projects, difficulty going to sleep, and social problems from being aggressive, loud, or impatient." [HPO:curators]
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 HP:0007973 Retinal dysplasia 
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 HP:0008142 Absent talus and calcaneal ossification in infancy 
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 HP:0008271 Abnormal cartilage collagen on EM 
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 HP:0008587 Mild neurosensory hearing loss 
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 HP:0008788 Delayed pubic bone ossification 
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 HP:0008800 Limited hip movement 
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 HP:0008819 Narrow, short femoral neck "An abnormally short and narrow femoral neck (which is the process of bone, connecting the femoral head with the femoral shaft)." [HPO:curators]
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 HP:0008839 Hypoplastic pelvis 
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 HP:0008843 Hip osteoarthritis 
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 HP:0008857 Short-trunk dwarfism identifiable at birth 
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 HP:0008873 Short stature, disproportionate short-limbed "A type of short stature characterized by a short limbs but an average-sized trunk." [HPO:curators]
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 HP:0008905 Rhizomelic short stature 
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 HP:0008921 Neonatal short-limbed dwarfism 
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 HP:0008936 Muscular hypotonia of the trunk "Muscular hypotonia (abnormally low muscle tone) affecting the musculature of the trunk." [HPO:curators]
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 HP:0009290 Hypoplastic/small distal phalanx of the 4th finger "Hypoplastic/small distal phalanx of the 4th (ring) finger." [HPO:curators]
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 HP:0009566 Hypoplastic/small distal phalanx of the 2nd finger 
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 HP:0009778 Hypoplastic/small thumb 
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 HP:0009803 Hypoplastic/small phalanges of the hand 
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 HP:0009882 Hypoplasia of the distal phalanges of the hand 
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 HP:0010049 Hypoplastic/short metacarpal bones 
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 HP:0010230 Cone-shaped epiphyses of the phalanges of the hand "A cone-shaped appearance of the epiphyses of the fingers of the hand, producing a ball-in-a-socket appearance. The related entity angel-shaped epiphysis refers to a pronounced cone-shaped epiphysis in combination with a pseudoepiphysis at the distal end of a phalanx." [HPO:curators]
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 HP:0010306 Short thorax "Reduced inferior to superior extent of the thorax." [HPO:curators]
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 HP:0010454 Acetabular spurs "The presence of osteophytes (bone spurs), i.e., of bony projections originating from the acetabulum." [HPO:curators]
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 HP:0010501 Limitation of knee mobility "An abnormal limitation of knee joint mobility." [HPO:curators]
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 HP:0010579 Cone-shaped epiphyses 
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 HP:0010743 Hypoplasia of the metatarsal bones 
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 HP:0010885 Aseptic necrosis "A disease where there is cellular death (necrosis) of bone components due to interruption of the blood supply." [HPO:sdoelken]
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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 HP:0011304 Broad thumb "Increased thumb width without increased dorso-ventral dimension." [pmid:19125433]
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 HP:0011800 Midface retrusion "Posterior positions and/or vertical shortening of the infraorbital and perialar regions, or increased concavity of the face and/or reduced nasolabial angle." [DDD:jclayton-smith]
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 HP:0011819 Submucous cleft soft palate "A cleft of the muscular (soft) portion of the palate that is covered by mucous membrane. Soft-palate submucous clefts are characterized by a midline deficiency or lack of muscle tissue." [HPO:probinson]
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 HP:0011860 Metaphyseal dappling "The presence of spots or rounded patches of abnormally increased density of metaphyseal bone." [HPO:probinson]
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 HP:0012221 Pretibial blistering "A type of blistering that affects the skin of the tibial region." [HPO:probinson, pmid:15265795]
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 HP:0012230 Rhegmatogenous retinal detachment "A type of retinal detachment associated with a retinal tear, that is, with a break in the retina that allows fluid to pass from the vitreous space into the subretinal space between the sensory retina and the retinal pigment epithelium." [HPO:probinson]
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 HP:0012313 Heberden s node "Bony swelling of the distal interphalangeal joint (DIP) associated with the formation of osteophytes (calcific spurs) of the articular (joint) cartilage thzat are visible radiographically." [HPO:probinson, pmid:10531070, pmid:9709182]
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 HP:0012368 Flat face "Absence of concavity or convexity of the face when viewed in profile." [pmid:19125436]
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 HP:0025258 Stiff neck "A sensation of tightness in the neck when attempting to move it, especially after a period of inactivity. Neck stiffness often involves soreness and difficulty moving the neck, especially when trying to turn the head to the side." []
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 HP:0030041 Schmorl s node "A Schmorl???s node is the herniation of nucleus pulposus through the cartilaginous and bony end plate into the body of the adjacent vertebra. " []
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 HP:0030329 Retinal thinning "Reduced anteroposterior thickness of the retina. This phenotype can be appreciated by retinal optical coherence tomography (OCT)." [HPO:probinson]
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 HP:0030672 Asteroid hyalosis "The presence of small, white vitreous opacities consisting of calcium phosphate and complex, layered lipid deposits." []
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 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
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 HP:0040160 Generalized osteoporosis 
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 HP:0100255 Metaphyseal dysplasia "The presence of dysplastic regions in metaphyseal bones." [HPO:sdoelken]
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 HP:0100541 Femoral hernia "A hernia which occurs just below the inguinal ligament, where abdominal contents pass through a naturally occurring weakness called the femoral canal." [HPO:sdoelken]
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 HP:0100559 Lower limb asymmetry 
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 HP:0100625 Enlarged thorax 
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 HP:0100734 Abnormality of the vertebral epiphyses 
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 HP:0100773 Cartilage destruction 
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 HP:0100777 Exostoses 
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 HP:0100864 Hypoplasia of the femoral neck 
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 HP:0200003 Splayed epiphyses 
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 HP:0200041 skin erosion "A discontinuity of the skin exhibiting incomplete loss of the epidermis, a lesion that is moist, circumscribed, and usually depressed." [HPO:SKOEHLER]
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 HP:0200083 Severe limb shortening 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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