ENSG00000171502


Homo sapiens

Features
Gene ID: ENSG00000171502
  
Biological name :COL24A1
  
Synonyms : COL24A1 / collagen type XXIV alpha 1 chain / Q17RW2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p22.3
Gene start: 85729233
Gene end: 86156943
  
Corresponding Affymetrix probe sets: 238732_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000434740
Ensembl peptide - ENSP00000359603
Ensembl peptide - ENSP00000409515
Ensembl peptide - ENSP00000432605
NCBI entrez gene - 255631     See in Manteia.
OMIM - 610025
RefSeq - XM_017000930
RefSeq - XM_017000924
RefSeq - XM_017000925
RefSeq - XM_017000926
RefSeq - XM_017000927
RefSeq - XM_017000928
RefSeq - XM_017000929
RefSeq - NM_001349955
RefSeq - NM_152890
RefSeq Peptide - NP_001336884
RefSeq Peptide - NP_690850
swissprot - F8WDM8
swissprot - H0YCZ7
swissprot - Q17RW2
swissprot - E9PNK8
Ensembl - ENSG00000171502
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 COL24A1ENSGALG00000006864Gallus gallus
 Q30D77ENSMUSG00000028197Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8IZC6 / COL27A1 / collagen type XXVII alpha 1 chainENSG0000019673947
COL5A1 / P20908 / collagen type V alpha 1 chainENSG0000013063534
P13942 / COL11A2 / collagen type XI alpha 2 chainENSG0000020424833
P12107 / COL11A1 / collagen type XI alpha 1 chainENSG0000006071833
COL1A1 / P02452 / collagen type I alpha 1 chainENSG0000010882132
COL2A1 / P02458 / collagen type II alpha 1 chainENSG0000013921932
COL5A3 / P25940 / collagen type V alpha 3 chainENSG0000008057332
COL5A2 / P05997 / collagen type V alpha 2 chainENSG0000020426231
COL3A1 / P02461 / collagen type III alpha 1 chainENSG0000016854230
COL1A2 / P08123 / collagen type I alpha 2 chainENSG0000016469229


Protein motifs (from Interpro)
Interpro ID Name
 IPR000885  Fibrillar collagen, C-terminal
 IPR001791  Laminin G domain
 IPR008160  Collagen triple helix repeat
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR016133  Insect cysteine-rich antifreeze protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002244 hematopoietic progenitor cell differentiation IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 molecular_functionGO:0005201 extracellular matrix structural constituent IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
Collagen biosynthesis and modifying enzymes
Assembly of collagen fibrils and other multimeric structures
MET activates PTK2 signaling
Collagen chain trimerization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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