ENSMUSG00000022483


Mus musculus

Features
Gene ID: ENSMUSG00000022483
  
Biological name :Col2a1
  
Synonyms : Col2a1 / Collagen alpha-1(II) chain Collagen alpha-1(II) chain Chondrocalcin / P28481
  
Possible biological names infered from orthology : collagen type II alpha 1 chain / P02458
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: F1
Gene start: 97975602
Gene end: 98004695
  
Corresponding Affymetrix probe sets: 10432045 (MoGene1.0st)   1450567_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000023123
Ensembl peptide - ENSMUSP00000085693
NCBI entrez gene - 12824     See in Manteia.
MGI - MGI:88452
RefSeq - XM_006520386
RefSeq - NM_001113515
RefSeq - NM_031163
RefSeq Peptide - NP_112440
RefSeq Peptide - NP_001106987
swissprot - P28481
Ensembl - ENSMUSG00000022483
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 col2a1aENSDARG00000069093Danio rerio
 col2a1bENSDARG00000011407Danio rerio
 COL2A1ENSG00000139219Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Col1a1 / P11087 / Collagen alpha-1(I) chain / P02452* / collagen type I alpha 1 chain*ENSMUSG0000000150669
Col5a2 / Q3U962 / Collagen alpha-2(V) chain / P05997* / collagen type V alpha 2 chain*ENSMUSG0000002604265
Col3a1 / P08121 / Collagen alpha-1(III) chain / P02461* / collagen type III alpha 1 chain*ENSMUSG0000002604360
Col1a2 / Q01149 / Collagen alpha-2(I) chain / P08123* / collagen type I alpha 2 chain*ENSMUSG0000002966157
Col5a1 / O88207 / Collagen alpha-1(V) chain / P20908* / collagen type V alpha 1 chain*ENSMUSG0000002683746
Q61245 / Col11a1 / Collagen alpha-1(XI) chain / P12107* / collagen type XI alpha 1 chain*ENSMUSG0000002796645
Q64739 / Col11a2 / Collagen alpha-2(XI) chain / P13942* / collagen type XI alpha 2 chain*ENSMUSG0000002433044
Col5a3 / collagen, type V, alpha 3 / P25940* / collagen type V alpha 3 chain*ENSMUSG0000000409843
Q5QNQ9 / Col27a1 / Collagen alpha-1(XXVII) chain / Q8IZC6* / collagen type XXVII alpha 1 chain*ENSMUSG0000004567238
Q30D77 / Col24a1 / Collagen alpha-1(XXIV) chain / Q17RW2* / collagen type XXIV alpha 1 chain*ENSMUSG0000002819736


Protein motifs (from Interpro)
Interpro ID Name
 IPR000885  Fibrillar collagen, C-terminal
 IPR001007  VWFC domain
 IPR008160  Collagen triple helix repeat
 IPR014716  Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1
 IPR016133  Insect cysteine-rich antifreeze protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development IEA
 biological_processGO:0001502 cartilage condensation IMP
 biological_processGO:0001503 ossification IEP
 biological_processGO:0001894 tissue homeostasis IMP
 biological_processGO:0001958 endochondral ossification IMP
 biological_processGO:0002062 chondrocyte differentiation IEP
 biological_processGO:0003007 heart morphogenesis IMP
 biological_processGO:0006029 proteoglycan metabolic process IMP
 biological_processGO:0007417 central nervous system development IEP
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0007605 sensory perception of sound IEA
 biological_processGO:0010468 regulation of gene expression IMP
 biological_processGO:0030199 collagen fibril organization IEA
 biological_processGO:0030903 notochord development IEP
 biological_processGO:0035108 limb morphogenesis IMP
 biological_processGO:0042472 inner ear morphogenesis IMP
 biological_processGO:0048705 skeletal system morphogenesis IMP
 biological_processGO:0048839 inner ear development IMP
 biological_processGO:0051216 cartilage development IMP
 biological_processGO:0060021 roof of mouth development IMP
 biological_processGO:0060174 limb bud formation IEP
 biological_processGO:0060272 embryonic skeletal joint morphogenesis IEA
 biological_processGO:0060348 bone development IMP
 biological_processGO:0060351 cartilage development involved in endochondral bone morphogenesis IMP
 biological_processGO:0071599 otic vesicle development IEP
 biological_processGO:0071773 cellular response to BMP stimulus IDA
 biological_processGO:0097065 anterior head development IMP
 biological_processGO:2001240 negative regulation of extrinsic apoptotic signaling pathway in absence of ligand IMP
 cellular_componentGO:0005576 extracellular region ISO
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005585 collagen type II trimer IEA
 cellular_componentGO:0005604 basement membrane IDA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0031012 extracellular matrix IEA
 molecular_functionGO:0005201 extracellular matrix structural constituent IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0042289 MHC class II protein binding IEA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0048407 platelet-derived growth factor binding IEA


Pathways (from Reactome)
Pathway description
Collagen degradation
Extracellular matrix organization
Collagen biosynthesis and modifying enzymes
Signaling by PDGF
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell
Assembly of collagen fibrils and other multimeric structures
Integrin cell surface interactions
Non-integrin membrane-ECM interactions
ECM proteoglycans
NCAM1 interactions
MET activates PTK2 signaling
Collagen chain trimerization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000063 reduced bone density "decreased mineral content of bone; indicator of bone strength" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:CLS, J:57315]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0000065 abnormal bone marrow cavities "absence or abnormal size or shape of the medullary cavities of the bones" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:61295]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

 MP:0000074 abnormal neurocranium morphology "malformed bones of the skull enclosing the brain" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:55583]
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Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

 MP:0000088 short mandible "reduced length of the lower bony framework of the mouth where the inferior teeth are held" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0000103 nasal bone hypoplasia "reduced cell number in the bone which forms the nasal bridge" [J:53370]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0000111 cleft palate "congenital fissure of the tissues normally uniting to form the palate" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:49840]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1tm1Prc/Col2a1+
Genetic Background: involves: 129/Sv * C57BL/6

Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

Allelic Composition: Col2a1M2J/Col2a1+
Genetic Background: B6;C3Fe-Col2a1M2J/GrsrJ

Allelic Composition: Col2a1Lpk/Col2a1Lpk
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0000130 abnormal cancellous bone morphology "structural anomaly of bone that has a latticelike or spongy structure" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0000131 abnormal long bone epiphysis morphology "the head of a developing long bone that is separated from the shaft by the epiphyseal plate" [J:61509]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

Allelic Composition: Col2a1Dmm/Col2a1+
Genetic Background: involves: 101 * C3H

Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0000133 abnormal long bone metaphysis morphology "malformed conical section of bone between the epiphysis and diaphysis of the long bones" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:61295]
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Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0000137 abnormal vertebrae morphology "malformed bony segment of the spinal column" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+
Genetic Background: 129S/Sv-Col2a1tm1(SOX9)Crm

Allelic Composition: Col2a1Rgsc856/Col2a1Rgsc856
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0000141 abnormal vertebral body morphology "malformed main portion of the vertebra anterior to the vertebral canal" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:55583]
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Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

 MP:0000149 abnormal scapula morphology "malformation of either or both of the large, flat bones of the back part of the shoulder" [J:13049]
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Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0000150 abnormal rib morphology "malformed bones forming the bony wall of the chest" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:50311]
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Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

 MP:0000163 abnormal cartilage morphology "anomalous structure or development of the nonvascular, resilient, flexible connective tissue found primarily in joints, walls of the throax, and tubular structures, but which also comprises most of the skeleton in early fetal life " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: AqrGt(PT1-ATG)193Wrst/AqrGt(PT1-ATG)193Wrst
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1Lpk/Col2a1Lpk
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0000164 abnormal cartilage development "anomalous formation of the nonvascular, resilient, flexible connective tissue found primarily in joints, walls of the throax, and tubular structures, but which also comprises most of the skeleton in early fetal life " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1tm1Prc/Col2a1+
Genetic Background: involves: 129/Sv * C57BL/6

Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1Lpk/Col2a1Lpk
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0000165 abnormal hypertrophic chondrocyte zone "anomaly of the cartilage cell matrix layer " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:58795]
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Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

 MP:0000166 abnormal chondrocyte morphology "anomalous structure, organization, or differentiation of nondividing cartilage cells" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:40203]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1tm1Prc/Col2a1+
Genetic Background: involves: 129/Sv * C57BL/6

Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

Allelic Composition: Col2a1Rgsc856/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Rgsc856/Col2a1Rgsc856
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1Lpk/Col2a1Lpk
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0000285 abnormal cardiac valve morphology "malformation of the membranous folds of the heart that prevent reflux of fluid" [J:18048]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

 MP:0000432 abnormal head morphology "anomalous structure or development of the portion of the body containing the brain and organs of sight, hearing, taste, and smell " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Acetm1Keb/Acetm1Keb
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

Allelic Composition: Col2a1tm1.1Ksec/Col2a1+
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec,Nodaltm1Rob/Nodal+
Genetic Background: involves: 129S/SvEv * 129X1/SvJ * C57BL/6

Allelic Composition: Col2a1tm1.1Ksec/Col2a1+,Nodaltm1Rob/Nodal+
Genetic Background: involves: 129S/SvEv * 129X1/SvJ * C57BL/6

 MP:0000433 microcephaly "an abnormally small head" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Acetm1Keb/Acetm1Keb
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6

Allelic Composition: Col2a1tm1.1Ksec/Col2a1+
Genetic Background: involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6

Allelic Composition: Bmpr1atm1Bhr/Bmpr1a+,Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6

Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0000435 shortened head "reduced anterior-posterior length of the head" [J:42035]
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Allelic Composition: Col2a1Dmm/Col2a1+
Genetic Background: involves: 101 * C3H

 MP:0000438 abnormal skull morphology "anomalous structure or development of the cranium" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0000440 domed skull 
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Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+
Genetic Background: 129S/Sv-Col2a1tm1(SOX9)Crm

Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

 MP:0000443 abnormal snout morphology "anomalous structure or development of the anterior facial part of the muzzle" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Acetm1Keb/Acetm1Keb
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

 MP:0000445 short snout "reduced length of the anterior facial part of the muzzle" [J:53370]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1tm1Prc/Col2a1+
Genetic Background: involves: 129/Sv * C57BL/6

Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+
Genetic Background: 129S/Sv-Col2a1tm1(SOX9)Crm

Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Col2a1Rgsc856/Col2a1Rgsc856
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1M2J/Col2a1+
Genetic Background: B6;C3Fe-Col2a1M2J/GrsrJ

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1M3J/Col2a1+
Genetic Background: B6(Cg)-Col2a1M3J/GrsrJ

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

Allelic Composition: Col2a1Rgsc413/Col2a1Rgsc413
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0000457 maxilla hypoplasia "arrested growth or atrophy of the upper bony framework of the mouth where the superior teeth are held" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, tc:Teresa Chu , Mouse Genome Informatics Curator, J:54637]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0000533 kidney hemorrhage "bleeding in the organ of excretion" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, tc:Teresa Chu , Mouse Genome Informatics Curator]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

 MP:0000547 short limbs "reduced average length of the extremities" [MGI:CLS, J:61509]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1tm1Prc/Col2a1+
Genetic Background: involves: 129/Sv * C57BL/6

Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

Allelic Composition: Col2a1Dmm/Col2a1+
Genetic Background: involves: 101 * C3H

Allelic Composition: Col2a1Rgsc413/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Rgsc856/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: either: C3H.Cg-Col2a1Lpk/H or (involves: C3H/HeH * C57BL/6J)

Allelic Composition: Col2a1Rgsc856/Col2a1Rgsc856
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

Allelic Composition: Col2a1Rgsc413/Col2a1Rgsc413
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0000550 abnormal forelimb morphology "malformation of the entire anterior extremities" [MGI:tc]
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Allelic Composition: Col2a1Rgsc856/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0000556 abnormal hindlimb morphology "malformation of the entire posterior extremities" [MGI:tc]
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Allelic Composition: Col2a1Rgsc856/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0000572 abnormal autopod morphology "malformation of the hand or foot" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

 MP:0000783 abnormal forebrain morphology "malformed or absent anterior primitive cerebral vesicle; most rostral of three primary vesicles of the embryonic neural tube" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:38857]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0000830 abnormal diencephalon morphology "any malformation or absence of the paired caudal parts of the prosencephalon from which the thalamus, hypothalamus, epithalamus and subthalamus are derived; these regions regulate autonomic, visceral and endocrine function, and process information directed to the cerebral cortex" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, Principles of Neural Science , 3rd edition:ISBN 0-8385-8034-3]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0000913 abnormal brain development "malformed or incomplete differentiation of the brain" [MGI:cls, J:49840]
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Allelic Composition: Acetm1Keb/Acetm1Keb
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

 MP:0001081 abnormal cranial ganglia morphology "any anomaly, deformity, or malformation of the groups of nerve cell bodies associated with the twelve cranial nerves" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:cls, J:45302]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0001178 pulmonary hypoplasia "reduced size of the respiratory organ due to incomplete development of all or part of the organ " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Pathology , 2nd edition:ISBN 0-397-51047-0]
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Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

 MP:0001258 decreased body length "decreased crown to tail distance compared to controls" [cwg:Carroll W. Goldsmith, Mouse Genome Informatics Curator]
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Allelic Composition: Ush1cdfcr/Ush1cdfcr
Genetic Background: involves: BALB/cByJ

Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0001260 increased body weight "greater than normal average weight " [J:33400]
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Allelic Composition: Col2a1M2J/Col2a1+
Genetic Background: B6;C3Fe-Col2a1M2J/GrsrJ

 MP:0001262 decreased body weight "lower than normal average weight " [J:61295]
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Allelic Composition: Ush1cdfcr/Ush1cdfcr
Genetic Background: involves: BALB/cByJ

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0001265 reduced body size "smaller than average body weight, height and/or length of an organism compared to controls" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:23170]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1tm1Prc/Col2a1+
Genetic Background: involves: 129/Sv * C57BL/6

Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+
Genetic Background: 129S/Sv-Col2a1tm1(SOX9)Crm

Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+,Sox9tm1Crm/Sox9+
Genetic Background: involves: 129S4/SvJae

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

Allelic Composition: Col2a1Rgsc413/Col2a1Rgsc413
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0001270 distended abdomen "abdomen appears curved outward or swollen; can be due to skeletal axial defects, enlarged visceral organs or megacolon" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0001286 abnormal eye development "malformation or arrest of differentiation of the visual organ" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:cls, J:49840]
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Allelic Composition: Acetm1Keb/Acetm1Keb
Genetic Background: involves: 129S1/Sv * 129X1/SvJ

 MP:0001303 abnormal lens morphology "malformed transparent structure of the eye responsible for focusing light rays" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:40203]
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Allelic Composition: Col2a1tm1Prc/Col2a1+
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0001328 disorganized retinal layers "delaminated or mispositioned sheets of cells comprising the optic part of the retina" [J:33400]
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Allelic Composition: Ush1cdfcr/Ush1cdfcr
Genetic Background: involves: BALB/cByJ

 MP:0001410 head bobbing "compulsive up and down movement of the head" [J:17123]
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Allelic Composition: Ush1cdfcr/Ush1cdfcr
Genetic Background: involves: BALB/cByJ

 MP:0001411 spinning "compulsive rolling of the body" [J:17123]
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Allelic Composition: Ush1cdfcr/Ush1cdfcr
Genetic Background: involves: BALB/cByJ

 MP:0001533 abnormal skeleton physiology "anomalous function of the bony framework of the body" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Relatm1Rsch/Relatm1Rsch,Tg(Cd4-cre)1Cwi/0
Genetic Background: involves: C57BL/6 * DBA/2

 MP:0001575 cyanosis "a dark bluish or purple skin discoloration resulting from deficient oxygenation of the blood" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60159]
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Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0001663 abnormal digestive system physiology "altered function of the organ system that converts ingested food to nutrients and energy" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Ush1cdfcr/Ush1cdfcr
Genetic Background: involves: BALB/cByJ

 MP:0001698 reduced embryo size "smaller proportions of embryo compared to littermates" [J:61790]
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Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

 MP:0001942 abnormal lung volume "anomaly in the amount of air that the lungs contain at various points of the respiratory cycle" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

 MP:0001954 respiratory distress "physical difficulty or inability to breathe" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:54931]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+
Genetic Background: 129S/Sv-Col2a1tm1(SOX9)Crm

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0002064 seizures "sudden and often acute manifestation of epileptic attack, sometimes convulsive" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Ush1cdfcr/Ush1cdfcr
Genetic Background: involves: BALB/cByJ

 MP:0002089 abnormal postnatal growth/weight/body size "increased or decreased average body size, weight or growth characteristic abnormalities manifesting after birth" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Col2a1Dmm/Col2a1+
Genetic Background: involves: 101 * C3H

 MP:0002109 abnormal limb morphology "abnormal development of limbs resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Scn8am11J/Scn8am11J
Genetic Background: B6.Cg-Scn8am11J/GrsrJ

 MP:0002111 abnormal tail morphology "abnormal development of the tail resulting in structural abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1+
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Bmpr1atm1Bhr/Bmpr1a+,Col2a1tm1.1Ksec/Col2a1+
Genetic Background: involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6

 MP:0002113 abnormal skeleton development "anomalous differentiation or remodeling of bone tissue resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Col2a1tm1Prc/Col2a1+
Genetic Background: involves: 129/Sv * C57BL/6

Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+,Sox9tm1Crm/Sox9+
Genetic Background: involves: 129S4/SvJae

Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0002114 abnormal axial skeleton morphology "abnormal development of vertebral, spinal or sternal bones resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+
Genetic Background: 129S/Sv-Col2a1tm1(SOX9)Crm

 MP:0002115 abnormal skeleton extremities morphology "abnormal development of limb, foot or tail bones resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

 MP:0002116 abnormal craniofacial bone morphology "abnormal development of cranial or facial bones resulting in morphological abnormality" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+
Genetic Background: 129S/Sv-Col2a1tm1(SOX9)Crm

 MP:0002151 abnormal neural tube morphology/development "anomalous structure of or development of the embryonic neural tube resulting in structural anomaly" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6

Allelic Composition: Bmpr1atm1Bhr/Bmpr1a+,Col2a1tm1.1Ksec/Col2a1+
Genetic Background: involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6

 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: PhexMhdabap024/PhexMhdabap024
Genetic Background: C3HeB/FeJ-PhexMhdabap024

Allelic Composition: Col2a1tm1Dshh/Col2a1+
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0002270 abnormal alveoli morphology "any structural anomaly of the outpouching of the respiratory system where gas exchange occurs" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

 MP:0002427 dwarfism "abnormally undersized with disproportionate body parts" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

Allelic Composition: Col2a1Dmm/Col2a1+
Genetic Background: involves: 101 * C3H

Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

 MP:0002544 brachydactyly "abnormally short digits" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Col2a1Rgsc856/Col2a1Rgsc856
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0002657 chondrodystrophy "abnormal development of the cartilage primordia of long bones, resulting in abnormally short extremities but normal head and trunk" [il:Ira Lu , Mouse Genome Informatics Curator]
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Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0002764 short tibia " reduced length of the medial and larger bone of the lower leg" [J:12736, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
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Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0002765 short fibula "reduced length of the lateral and smaller of bone of the lower leg" [pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator, J:12736]
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Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0002932 abnormal joint "defect in the articulation point of two or more bones" [RGD:Rat Genome Database submission, MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0003055 abnormal epiphyseal plate morphology "malformed or absent cartilagenous center of ossification on the long bones permitting growth of the bone in both directions during development" [MeSH:National Library of Medicine - Medical Subject Headings, 2003]
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Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+
Genetic Background: 129S/Sv-Col2a1tm1(SOX9)Crm

Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

 MP:0003056 abnormal hyoid bone "anomalous structure of the U-shaped bone lying between the mandible and the larynx that supports the tongue muscles" [Stedman s Medical Dictionary, 27th edition:ISBN 0-683-40008-8, hdene:Howard Dene, Mouse Genome Informatics Curator]
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Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+
Genetic Background: 129S/Sv-Col2a1tm1(SOX9)Crm

 MP:0003109 short femur "reduced length of the long bone of the thigh" [ava:Anna V. Anagnostopoulos, Mouse Genome Informatics Curator, Stedman s Medical Dictionary, 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Col2a1Rgsc856/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0003232 abnormal forebrain development "anomaly in the formation or patterning of the anterior primitive cerebral vesicle; most rostral of three primary vesicles of the embryonic neural tube" [J:93081, smb:Susan M Bello, Mouse Genome Informatics Curator]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1+
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0003409 decreased width of hypertrophic chondrocyte zone "decreased width of cartilage cell matrix layer " [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0003419 delayed endochondral bone ossification "late onset of bone formation in bones that form from cartilage" [smb:Susan M Bello, Mouse Genome Informatics Curator, J:94631]
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Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0003425 abnormal optic vesicle formation "anomalous formation of the hollow outgrowth from the lateral aspects of the embryonic forebrain from which the retina and optic nerve develop" [smb:Susan M Bello, Mouse Genome Informatics Curator, J:94391]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0003560 osteoarthritis "a type of arthritis that is caused by the breakdown and eventual loss of the cartilage of one or more joints" [smb:Susan M Bello, Mouse Genome Informatics Curator, J:95374]
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Allelic Composition: Col2a1tm1Prc/Col2a1+,Col9a1tm1Jae/Col9a1tm1Jae
Genetic Background: involves: 129/Sv * 129S2/SvPas

 MP:0003662 abnormal proliferative zone "germinal layer of the epiphyseal plate where cells are actively dividing as well as producing extracellular matrix" [smb:Susan M Bello, Mouse Genome Informatics Curator, J:96254]
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Allelic Composition: Col2a1Rgsc413/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Rgsc856/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Rgsc856/Col2a1Rgsc856
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Lpk/Col2a1Lpk
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

Allelic Composition: Col2a1Rgsc413/Col2a1Rgsc413
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0003723 abnormal long bone morphology "malformation of any of the several elongated bones of the extremities " [monikat:Monika Tomczuk, Mouse Genome Informatics Curator]
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Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

 MP:0003795 abnormal bone structure 
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Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0004134 abnormal chest morphology "malformation of the part of the body between the neck and the abdomen " [smb:Susan M Bello, Mouse Genome Informatics Curator, J:59168]
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Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0004148 increased cortical bone thickness "thicker than normal superficial layer of compact bone" [brs:Beverly Richards-Smith, Mouse Genome Informatics Curator]
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Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0004200 reduced fetal size "smaller proportions of a fetus compared to littermates (sensu Mus: from E14 through birth)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1tm1Prc/Col2a1+
Genetic Background: involves: 129/Sv * C57BL/6

Allelic Composition: Col2a1Rgsc856/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Rgsc856/Col2a1Rgsc856
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Lpk/Col2a1Lpk
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0004282 retrognathia "abnormal posterior positioning of one or both jaws, particularly the mandible, relative to the facial skeleton and soft tissues" [J:41682, MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0004351 short humerus "reduced length of one or both of the bones of the forelimb that articulates with the scapula above and the radius and ulna below" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: Col2a1Rgsc856/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0004355 short radius "reduced length of the short bone of the lateral forearm" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: Col2a1Rgsc856/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0004356 radius hypoplasia "underdevelopment or reduced size, usually due to a reduced number of cells, in the short bone of the lateral forearm" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+
Genetic Background: 129S/Sv-Col2a1tm1(SOX9)Crm

 MP:0004359 short ulna "reduced length of the medial and larger of the two bones of the forearm" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: Col2a1Rgsc856/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0004471 short nasal bone "reduced length of either of two rectangular bone plates forming the bridge of the nose" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

 MP:0004509 abnormal pelvic girdle bone morphology "any structural anomaly of the bones of the pelvis by which the limbs attach to the axial skeleton " [MGI:cwg "Carroll-Ann W. Goldsmith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1Rgsc856/Col2a1Rgsc856
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

Allelic Composition: Col2a1Rgsc413/Col2a1Rgsc413
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0004599 abnormal vertebral arch morphology "any structural anomaly of the dorsal part of a vertebra, consisting of a pair of pedicles, a pair of laminae, and seven processes (four articular processes, two transverse processes, and one spinous process)" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

 MP:0004624 abnormal thoracic cage "any structural anomaly of the bony and cartilaginous structure enclosing the thoracic cavity, consisting of the thoracic vertebrae, ribs, costal cartilages, and sternum" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0004667 vertebral body hypoplasia "underdevelopment or reduced size, usually due to a reduced number of cells, of the main cylindrical portion of the vertebra ventral to the vertebral canal" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: Col2a1Rgsc856/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0004669 enlarged vertebral body "increased size of the main cylindrical portion of the vertebra ventral to the vertebral canal" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

 MP:0004672 short ribs "reduced length of the bones forming the bony wall of the chest" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

 MP:0004683 absent intervertebral disk "absence of the cartilaginous and gelatinous structure found between vertebrae" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator", MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

 MP:0004686 decreased length of long bones "reduced end-to-end length of the several elongated bones of the extremities" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+
Genetic Background: 129S/Sv-Col2a1tm1(SOX9)Crm

Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

Allelic Composition: Col2a1Lpk/Col2a1Lpk
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0004704 short vertebral column "decreased rostral-caudal length of the complete structure forming the rostral-caudal axis of the skeleton formed from the alternating segments of vertebra and intervertebral discs which support the spinal cord" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

 MP:0004708 short lumbar vertebrae "reduced length of any or all of the six bony segments of the spine located anterior to the sacral vertebrae and posterior to the thoracic vertebrae" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0004711 persistence of notochord tissue "failure of notochord tissue to differentiate into the vertebral primordia during development resulting in the presence of notochord tissue at later stages than it is normally seen" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

 MP:0004871 premaxilla hypoplasia "underdevelopment or reduced size, usually due to a reduced number of cells, in the anterior and interior portion of the maxilla" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0004872 absent nasal septum "absence of the structure that separates the two nasal cavities" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0005108 abnormal ulna morphology "malformation of the medial and larger of the two bones of the forearm" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:83132]
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Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0005157 holoprosencephaly "presence of a single forebrain hemisphere or lobe; often accompanied by a deficit in median facial development" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:83058]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0005163 cyclopia "a congenital defect in which the two orbits are united to form a single cavity containing one eye" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60303]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6

Allelic Composition: Col2a1tm1.1Ksec/Col2a1+
Genetic Background: involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6

Allelic Composition: Bmpr1atm1Bhr/Bmpr1a+,Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6

 MP:0005193 abnormal anterior eye segment morphology "anomalous structure of any of the parts of the eye that lie in front of, or ventral to, the lens (inclusive) " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Col2a1tm1Prc/Col2a1+
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0005195 abnormal posterior eye segment morphology "anomalous structure of any of the parts of the eye that lie in back of, or dorsal to, the lens (but not inclusive) " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Col2a1tm1Prc/Col2a1+
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0005225 abnormal vertebrae development "anomalous formation of the vertebrae from the sclerotome" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0005306 abnormal phalanx morphology "aberrant structure of any of the long bones of the digits" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0005352 small skull "less than the normal size of the cranium" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

 MP:0005458 increased percent body fat "more fat, relative to the norm, as a percentage of total body weight" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Col2a1M2J/Col2a1+
Genetic Background: B6;C3Fe-Col2a1M2J/GrsrJ

 MP:0005459 decreased percent body fat "less fat, relative to the norm, as a percentage of total body weight" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Col2a1M2J/Col2a1+
Genetic Background: B6;C3Fe-Col2a1M2J/GrsrJ

 MP:0005508 abnormal skeleton morphology "malformation of the bony framework of the body in vertebrates" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Col2a1Rgsc856/Col2a1Rgsc856
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: C.B6(C3)-Col2a1Lpk

 MP:0005525 increased renal plasma flow rate "greater than the normal volume of plasma passing throught the kidney per unit time" [RGD:Rat Genome Database submission, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

 MP:0006198 enophthalmos "sinking or retraction of the eye back into the socket" [ncbi:Matthew Mailman, NCBI request, smb:Susan M Bello, Mouse Genome Informatics Curator]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Col2a1tm1.1Ksec/Col2a1+
Genetic Background: involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6

Allelic Composition: Bmpr1atm1Bhr/Bmpr1a+,Col2a1tm1.1Ksec/Col2a1+
Genetic Background: involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6

 MP:0006290 proboscis "a long, cylindric protuberance of the face that, in cyclopia or ethmocephaly, represents the nose" [J:92058, MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0006325 impaired hearing "reduced ability to percieve auditory stimuli" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Ush1cdfcr/Ush1cdfcr
Genetic Background: involves: BALB/cByJ

 MP:0006395 abnormal epiphyseal plate morphology "any structural anomaly of the cartilaginous center of ossification on the bones permitting growth of the bone in both directions during development" [MESH:A02.835.232.251.352]
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Allelic Composition: Col2a1Rgsc856/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Rgsc856/Col2a1Rgsc856
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0006397 disorganized long bone epiphyseal plate "a lack of the regular arrangement of the cells or zones of the epiphyseal plate" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

Allelic Composition: Col2a1Rgsc413/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1Lpk/Col2a1Lpk
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

Allelic Composition: Col2a1Rgsc413/Col2a1Rgsc413
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0006398 increased long bone epiphyseal plate size "greater than the normal size of the cartilaginous center of ossification on the long bones permitting growth of the bone in both directions during development" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

 MP:0006399 abnormal long bone epiphyseal ossification zone morphology "any anomaly in the structure of the layer of the epiphyseal plate where new bone matrix is deposited" [CALnet tutorial:http://137.222.110.150/calnet/Introanat/Introanat.htm, MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0006433 abnormal articular cartilage morphology "any structural anomaly of the thin layer of smooth hyaline cartilage located on the joint surfaces of a bone" [ISBN:0-8036-0655-9 "Taber s Cyclopedic Medical Dictionary", MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

 MP:0008069 abnormal joint mobility "anomaly in the ability to move joints in a full range of motion and with ease" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0008151 increased diameter of long bones "increased width of the cross-sectional distance that extends from one lateral edge of a long bone, through its center and to the opposite lateral edge" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1Lpk/Col2a1Lpk
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0008158 increased diameter of femur "increased width of the cross-sectional distance that extends from one lateral edge of the femur, through its center and to the opposite lateral edge" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0008159 increased diameter of fibula "increased width of the cross-sectional distance that extends from one lateral edge of the fibula, through its center and to the opposite lateral edge" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0008160 increased diameter of humerus "increased width of the cross-sectional distance that extends from one lateral edge of the humerus, through its center and to the opposite lateral edge" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0008161 increased diameter of radius "increased width of the cross-sectional distance that extends from one lateral edge of the radius, through its center and to the opposite lateral edge" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0008162 increased diameter of tibia "increased width of the cross-sectional distance that extends from one lateral edge of the tibia, through its center and to the opposite lateral edge" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0008163 increased diameter of ulna "increased width of the cross-sectional distance that extends from one lateral edge of the ulna, through its center and to the opposite lateral edge" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0008271 abnormal bone ossification "any anomaly in the formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance" [GO:0001503]
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Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0008272 abnormal endochondral bone ossification "anomaly in the process of the formation of bone by the replacement of cartilage tissue with mineralized bone" [GO:0001958]
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Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0008736 micromelia "disproportionately short or small limbs" [MGI:llw2 "Linda Washburn, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1Rgsc856/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0009266 abnormal mesendoderm development "failure or abnormality in the formation of the embryonic cell layer that gives rise to both the endoderm and mesoderm" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Col2a1tm1.1Ksec/Col2a1+
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0009780 abnormal chondrocyte physiology "any functional anomaly of nondividing cartilage cells" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: Col2a1Rgsc856/Col2a1+
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Rgsc856/Col2a1Rgsc856
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0009882 absent palatal shelf "absence of the palatal projections from the inner part of the maxillary processes that fuse to form the secondary palate" [PMID:16680722]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

 MP:0009890 cleft secondary palate "congenital fissure of the tissues normally uniting to form the secondary palate" [PMID:16680722]
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Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+
Genetic Background: 129S/Sv-Col2a1tm1(SOX9)Crm

 MP:0010029 abnormal basicranium morphology "any structural anomaly of the sloping floor of the cranial cavity that is comprised of parts of the ethmoidal, occipital and sphenoid bones" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
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Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+
Genetic Background: 129S/Sv-Col2a1tm1(SOX9)Crm

 MP:0010103 small thoracic cage "reduced size of the bony and cartilaginous structure enclosing the thoracic cavity, consisting of the thoracic vertebrae, ribs, costal cartilages, and sternum" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+
Genetic Background: 129S/Sv-Col2a1tm1(SOX9)Crm

 MP:0010869 decreased bone trabecula number "decreased number of intersecting plates and spicules in cancellous bone which form a meshwork of intercommunicating spaces filled with blood vessels and marrow; in mature bone, the trabeculae are aligned in parallel with the lines of major compressive or tensile force" [http://www.dorlands.com/ "Dorland s Illustrated Medical Dictionary, 31st edition", MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0010876 decreased bone volume "reduced amount of space occupied by bone tissue in the skeleton" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0010879 decreased trabecular bone volume "decrease in the amount of space occupied by trabecular bone tissue in the skeleton" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

 MP:0011086 partial postnatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms anytime between the neonatal period and weaning age (Mus: P1 to approximately 3 weeks of age)" [MGI:csmith]
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Allelic Composition: Col2a1Dmm/Col2a1+
Genetic Background: involves: 101 * C3H

 MP:0011087 complete neonatal lethality "death of all organisms of a given genotype in a population within the neonatal period after birth (Mus: P0)" [MGI:csmith]
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Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

 MP:0011088 partial neonatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms within the neonatal period after birth (Mus: P0)" [MGI:csmith]
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Allelic Composition: Col2a1tm1Prc/Col2a1+
Genetic Background: involves: 129/Sv * C57BL/6

Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+
Genetic Background: 129S/Sv-Col2a1tm1(SOX9)Crm

Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+,Sox9tm1Crm/Sox9+
Genetic Background: involves: 129S4/SvJae

 MP:0011089 complete perinatal lethality "death of all organisms of a given genotype in a population within the perinatal period (Mus: E18.5 through postnatal day 1)" [MGI:csmith]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

Allelic Composition: Col2a1Rgsc856/Col2a1Rgsc856
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Lpk/Col2a1Lpk
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1Rgsc413/Col2a1Rgsc413
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0011101 partial prenatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and birth (Mus: approximately E18.5)" [MGI:csmith]
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Allelic Composition: Col2a1Dmm/Col2a1Dmm
Genetic Background: involves: 101 * C3H

Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6

Allelic Composition: Bmpr1atm1Bhr/Bmpr1a+,Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6

 MP:0011175 platyspondylia "flatness of the bodies of the vertebrae; one or many vertebrae may be affected" [ISBN:0-683-40008-8]
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Allelic Composition: Col2a1Rgsc856/Col2a1Rgsc856
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

Allelic Composition: Col2a1Rgsc413/Col2a1Rgsc413
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0011495 abnormal head shape "any anomaly in the characteristic surface outline or contour of a head of an organism" [MGI:csmith]
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Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0011504 abnormal limb long bone morphology 
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Allelic Composition: Col2a1Lpk/Col2a1+
Genetic Background: involves: C3H/HeH * C57BL/6J

Allelic Composition: Col2a1mc13/Col2a1mc13
Genetic Background: involves: C57BL/6J * FVB/NJ

 MP:0011812 increased cranium length "having an increased dorsal-to-ventral distance of the cranium" [MGI:mberry]
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Allelic Composition: Col2a1M2J/Col2a1+
Genetic Background: B6;C3Fe-Col2a1M2J/GrsrJ

 MP:0012085 midface hypoplasia "underdevelopment of the midfacial region comprising the nasal, maxillary, and zygomatic bones, leading to a concave-looking face" [MGI:anna]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1+
Genetic Background: involves: 129X1/SvJ * C57BL/6

Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6

Allelic Composition: Col2a1tm1.1Ksec/Col2a1+
Genetic Background: involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6

Allelic Composition: Bmpr1atm1Bhr/Bmpr1a+,Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129S7/SvEvBrd * 129X1/SvJ * C57BL/6

 MP:0013817 absent nasal cavity "absence of the cavity of the respiratory tract that extends from the nares to the pharynx; the nasal cavity is lined with ciliated mucosa" [MESH:A04.531.449]
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Allelic Composition: Col2a1tm1.1Ksec/Col2a1tm1.1Ksec
Genetic Background: involves: 129X1/SvJ * C57BL/6

 MP:0014101 decreased chondrocyte proliferation "decreased amount of multiplication or reproduction of chondrocytes by cell division, resulting in the expansion of their population" [GO:0035988]
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Allelic Composition: Col2a1tm1(SOX9)Crm/Col2a1+
Genetic Background: 129S/Sv-Col2a1tm1(SOX9)Crm

 MP:0014103 increased chondrocyte apoptosis "increased number of chondrocytes undergoing programmed cell death" [MGI:csmith]
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Allelic Composition: Col2a1Rgsc413/Col2a1Rgsc413
Genetic Background: involves: C57BL/6JJcl * DBA/2JJcl

 MP:0014164 abnormal ciliary process morphology " any structural anomaly of any of the pigmented processes that radiate from the ciliary muscle and give attachments to ligaments supporting the lens of the eye; these processes increase in thickness as they advance from the orbiculus ciliaris to the external border of the iris, and together with the folds (plicae) in the furrows between them, constitute the corona ciliaris; ciliary processes produce aqueous humor" [http://www.medilexicon.com/medicaldictionary.php?s=processus+ciliaris]
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Allelic Composition: Col2a1tm1Prc/Col2a1+
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0030049 prominent forehead "forward prominence of the entire forehead, due to protrusion of the frontal bone; not to be confused with frontal bossing" [HP:0011220]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1tm1Prc/Col2a1+
Genetic Background: involves: 129/Sv * C57BL/6

 MP:0030384 short facial bone "length reduction or truncation of one or more facial bones" [MGI:anna]
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Allelic Composition: Brca1tm1Cxd/Brca1tm2Cxd,Tg(KRT5-cre)5132Jlj/0,Tg(KRT5-E2F1)2Dgj/0
Genetic Background: involves: 129S6/SvEvTac * C57BL/6 * SJL

Allelic Composition: Col2a1tm1Prc/Col2a1tm1Prc
Genetic Background: involves: 129/Sv

Allelic Composition: Col2a1tm1Dshh/Col2a1tm1Dshh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
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