12824


Mus musculus (NCBI)

Features
Gene ID: 12824
  
Biological name :
  
Synonyms : Col2a1 / Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|M100413|Rgsc413|Rgsc856 / collagen, type II, alpha 1
  
Possible biological names infered from orthology :
  
Species: Mus musculus (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 1450567_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: RefSeq - 166064040
RefSeq - 169658375
RefSeq - 568991246
RefSeq - NC_000081.6
RefSeq - NP_001106987.2
RefSeq - NP_112440.2
RefSeq - XP_006520449.1
RefSeq - NM_001113515.2
RefSeq - NM_031163.3
RefSeq - XM_006520386.3
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSMUSG00000022483 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001501 skeletal system development ISO
 biological_processGO:0001502 cartilage condensation IMP
 biological_processGO:0001503 ossification IEP
 biological_processGO:0001894 tissue homeostasis IMP
 biological_processGO:0001958 endochondral ossification IMP
 biological_processGO:0002062 chondrocyte differentiation IMP
 biological_processGO:0003007 heart morphogenesis IMP
 biological_processGO:0006029 proteoglycan metabolic process IMP
 biological_processGO:0007417 central nervous system development IEP
 biological_processGO:0007601 visual perception ISO
 biological_processGO:0007605 sensory perception of sound ISO
 biological_processGO:0010468 regulation of gene expression IMP
 biological_processGO:0030198 extracellular matrix organization IBA
 biological_processGO:0030199 collagen fibril organization ISO
 biological_processGO:0030903 notochord development IEP
 biological_processGO:0035108 limb morphogenesis IMP
 biological_processGO:0042472 inner ear morphogenesis IMP
 biological_processGO:0048705 skeletal system morphogenesis IMP
 biological_processGO:0048839 inner ear development IMP
 biological_processGO:0051216 cartilage development IMP
 biological_processGO:0060021 roof of mouth development IMP
 biological_processGO:0060174 limb bud formation IEP
 biological_processGO:0060272 embryonic skeletal joint morphogenesis ISO
 biological_processGO:0060348 bone development IMP
 biological_processGO:0060351 cartilage development involved in endochondral bone morphogenesis IMP
 biological_processGO:0071599 otic vesicle development IEP
 biological_processGO:0071773 cellular response to BMP stimulus IDA
 biological_processGO:0097065 anterior head development IMP
 biological_processGO:2001240 negative regulation of extrinsic apoptotic signaling pathway in absence of ligand IMP
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005581 collagen trimer IDA
 cellular_componentGO:0005585 collagen type II trimer ISO
 cellular_componentGO:0005604 basement membrane IDA
 cellular_componentGO:0005615 extracellular space ISO
 cellular_componentGO:0005737 cytoplasm ISO
 cellular_componentGO:0031012 extracellular matrix IDA
 cellular_componentGO:0062023 collagen-containing extracellular matrix ISO
 molecular_functionGO:0005201 extracellular matrix structural constituent IEA
 molecular_functionGO:0042289 MHC class II protein binding ISO
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0048407 platelet-derived growth factor binding ISO


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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