4060


Homo sapiens (NCBI)

Features
Gene ID: 4060
  
Biological name :
  
Synonyms : LDC|SLRR2D / LUM / lumican
  
Possible biological names infered from orthology :
  
Species: Homo sapiens (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: 201744_s_at (Human Genome U133 Plus 2.0 Array)   229554_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: RefSeq - 4505047
RefSeq - NC_000012.12
RefSeq - NP_002336.1
RefSeq - NM_002345.3
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSG00000139329 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0014070 response to organic cyclic compound IEA
 biological_processGO:0018146 keratan sulfate biosynthetic process TAS
 biological_processGO:0030198 extracellular matrix organization TAS
 biological_processGO:0030199 collagen fibril organization NAS
 biological_processGO:0032914 positive regulation of transforming growth factor beta1 production IEA
 biological_processGO:0042340 keratan sulfate catabolic process TAS
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0051216 cartilage development IEA
 biological_processGO:0070848 response to growth factor IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005583 fibrillar collagen trimer IDA
 cellular_componentGO:0005615 extracellular space HDA
 cellular_componentGO:0005796 Golgi lumen TAS
 cellular_componentGO:0031012 extracellular matrix TAS
 cellular_componentGO:0043202 lysosomal lumen TAS
 cellular_componentGO:0062023 collagen-containing extracellular matrix ISS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005201 extracellular matrix structural constituent NAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005518 collagen binding IDA
 molecular_functionGO:0030021 extracellular matrix structural constituent conferring compression resistance ISS


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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