777635


Danio rerio (NCBI)

Features
Gene ID: 777635
  
Biological name :
  
Synonyms : fc95g08|fi18a05|ik:tdsubs_rzpd609-29b19|plod|plod1|wu:fc29c10|wu:fc95g08|wu:fi18a05|zgc:152876 / plod1a / procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a
  
Possible biological names infered from orthology :
  
Species: Danio rerio (NCBI)
  
Chr. number:
Strand:
Band:
Gene start:
Gene end:
  
Corresponding Affymetrix probe sets: Dr.7688.1.A1_at (Zebrafish Array)   
  
Cross references: RefSeq - 225690536
RefSeq - NC_007119.7
RefSeq - NP_001071210.2
RefSeq - NM_001077742.2
  
See co-cited genes in PubMed
Warning: Please see the Ensembl gene model ENSDARG00000059746 to get all the annotations available for this gene.


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0017185 peptidyl-lysine hydroxylation IBA
 biological_processGO:0030199 collagen fibril organization IBA
 biological_processGO:0032963 collagen metabolic process IBA
 biological_processGO:0033333 fin development IMP
 biological_processGO:0033334 fin morphogenesis IMP
 biological_processGO:0046947 hydroxylysine biosynthetic process IBA
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0008475 procollagen-lysine 5-dioxygenase activity IEA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
 molecular_functionGO:0031418 L-ascorbic acid binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051213 dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
No match


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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