ENSDARG00000000068


Danio rerio

Features
Gene ID: ENSDARG00000000068
  
Biological name :slc9a3r1a
  
Synonyms : slc9a3r1a / solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1a
  
Possible biological names infered from orthology : O14745 / P70441 / SLC9A3R1 / SLC9A3 regulator 1 / solute carrier family 9 (sodium/hydrogen exchanger), member 3 regulator 1
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 33484458
Gene end: 33537126
  
Corresponding Affymetrix probe sets: Dr.17541.1.S1_at (Zebrafish Array)   NM_212707_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000000069
NCBI entrez gene - 327272     See in Manteia.
RefSeq - NM_212707
RefSeq Peptide - NP_997872
swissprot - Q6P2U7
ZFIN ID - ZDB-GENE-031006-7
Ensembl - ENSDARG00000000068
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC9A3R1ENSGALG00000007650Gallus gallus
 O14745ENSG00000109062Homo sapiens
 P70441ENSMUSG00000020733Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
pdzd3b / PDZ domain containing 3b / PDZD3* / Q86UT5* / PDZ domain containing 3*ENSDARG0000005565621
pdzd3a / PDZ domain containing 3a / PDZD3* / Q86UT5* / PDZ domain containing 3*ENSDARG0000004056821
pdzk1 / PDZ domain containing 1 / Q5T2W1* / Na(+)/H(+) exchange regulatory cofactor NHE-RF3 *ENSDARG0000002226121
CABZ01067151.1ENSDARG0000011347417
CU138547.1 / Q15599* / SLC9A3R2* / SLC9A3 regulator 2*ENSDARG0000007423113


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR015098  EBP50, C-terminal
 IPR017300  Na(+)/H(+) exchange regulatory cofactor NHERF


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006612 protein targeting to membrane IGI
 biological_processGO:0021591 ventricular system development IMP
 biological_processGO:0043113 receptor clustering IGI
 biological_processGO:0055078 sodium ion homeostasis IGI
 biological_processGO:0071599 otic vesicle development IMP
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0012505 endomembrane system IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0032947 protein-containing complex scaffold activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000051 otic vesicle otic vesicle lacks parts or has fewer parts of type otic epithelium cilium, abnormal
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 ZFA:0001261 ventricular system ventricular system hydrocephalic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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