ENSDARG00000000460


Danio rerio

Features
Gene ID: ENSDARG00000000460
  
Biological name :nitr2b
  
Synonyms : nitr2b / novel immune-type receptor 2b
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 17443567
Gene end: 17446703
  
Corresponding Affymetrix probe sets: Dr.12405.1.S1_s_at (Zebrafish Array)   NM_131649_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000060382
NCBI entrez gene - 60647     See in Manteia.
RefSeq - NM_131649
RefSeq Peptide - NP_571724
swissprot - Q90Z92
ZFIN ID - ZDB-GENE-001106-6
Ensembl - ENSDARG00000000460
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nitr2a / novel immune-type receptor 2aENSDARG0000004339866
nitr1f / novel immune-type receptor 1fENSDARG0000007951736
nitr3a / nitr3c / novel immune-type receptor 3aENSDARG0000007799835
nitr1b / nitr1m / novel immune-type receptor 1bENSDARG0000006977335
CU179759.1 / Danio rerio novel immune-type receptor 1d (nitr1d), mRNA.ENSDARG0000011206534
nitr1i / novel immune-type receptor 1iENSDARG0000003396334
nitr1k / novel immune-type receptor 1kENSDARG0000011039333
CU672228.2 / Danio rerio novel immune-type receptor 1l (nitr1l), mRNA.ENSDARG0000011712533
nitr1m / novel immune-type receptor 1mENSDARG0000008763133
nitr1b / novel immune-type receptor 1bENSDARG0000011514432
nitr1b / novel immune-type receptor 1bENSDARG0000006984831
nitr5 / novel immune-type receptor 5ENSDARG0000007755730
nitr13 / novel immune-type receptor 13ENSDARG0000003612529
nitr4a / novel immune-type receptor 4aENSDARG0000007528827
nitr9 / novel immune-type receptor 9ENSDARG0000002833326
nitr8 / novel immune-type receptor 8ENSDARG0000003674826
nitr12 / novel immune-type receptor 12ENSDARG0000009862626
nitr3c / novel immune-type receptor 3cENSDARG0000005762021


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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