ENSDARG00000110393


Danio rerio

Features
Gene ID: ENSDARG00000110393
  
Biological name :nitr1k
  
Synonyms : nitr1k / novel immune-type receptor 1k
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 17534485
Gene end: 17536165
  
Corresponding Affymetrix probe sets: Dr.20998.1.S1_at (Zebrafish Array)   NM_198348_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000130047
NCBI entrez gene - 60646     See in Manteia.
RefSeq - NM_198348
RefSeq Peptide - NP_938162
swissprot - Q8UV99
ZFIN ID - ZDB-GENE-001106-5
Ensembl - ENSDARG00000110393
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CU179759.1 / Danio rerio novel immune-type receptor 1d (nitr1d), mRNA.ENSDARG0000011206581
CU672228.2 / Danio rerio novel immune-type receptor 1l (nitr1l), mRNA.ENSDARG0000011712577
nitr1f / novel immune-type receptor 1fENSDARG0000007951777
nitr1b / novel immune-type receptor 1bENSDARG0000011514477
nitr1m / novel immune-type receptor 1mENSDARG0000008763176
nitr1i / novel immune-type receptor 1iENSDARG0000003396374
nitr1b / nitr1m / novel immune-type receptor 1bENSDARG0000006977372
nitr1b / novel immune-type receptor 1bENSDARG0000006984867
nitr2a / novel immune-type receptor 2aENSDARG0000004339835
nitr2b / novel immune-type receptor 2bENSDARG0000000046032
nitr3a / nitr3c / novel immune-type receptor 3aENSDARG0000007799832
nitr4a / novel immune-type receptor 4aENSDARG0000007528829
nitr8 / novel immune-type receptor 8ENSDARG0000003674828
nitr13 / novel immune-type receptor 13ENSDARG0000003612525
nitr9 / novel immune-type receptor 9ENSDARG0000002833325
nitr12 / novel immune-type receptor 12ENSDARG0000009862625
nitr5 / novel immune-type receptor 5ENSDARG0000007755724
nitr3c / novel immune-type receptor 3cENSDARG0000005762016


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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