ENSDARG00000057620


Danio rerio

Features
Gene ID: ENSDARG00000057620
  
Biological name :nitr3c
  
Synonyms : nitr3c / novel immune-type receptor 3c
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 17412992
Gene end: 17457872
  
Corresponding Affymetrix probe sets: Dr.12407.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000144681
Ensembl peptide - ENSDARP00000156465
Ensembl peptide - ENSDARP00000147068
Ensembl peptide - ENSDARP00000088826
Ensembl peptide - ENSDARP00000134088
Ensembl peptide - ENSDARP00000136630
NCBI entrez gene - 171006     See in Manteia.
RefSeq - NM_198355
RefSeq - NM_198354
RefSeq Peptide - NP_938168
RefSeq Peptide - NP_938169
swissprot - A0A0N4SU51
swissprot - A0A0G2KNY4
swissprot - F1QTA2
swissprot - Q801W9
ZFIN ID - ZDB-GENE-041001-13
Ensembl - ENSDARG00000057620
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nitr3a / nitr3c / novel immune-type receptor 3aENSDARG0000007799885
nitr2b / novel immune-type receptor 2bENSDARG0000000046029
nitr2a / novel immune-type receptor 2aENSDARG0000004339828
nitr8 / novel immune-type receptor 8ENSDARG0000003674826
nitr13 / novel immune-type receptor 13ENSDARG0000003612526
nitr4a / novel immune-type receptor 4aENSDARG0000007528826
nitr1i / novel immune-type receptor 1iENSDARG0000003396325
nitr5 / novel immune-type receptor 5ENSDARG0000007755725
nitr1f / novel immune-type receptor 1fENSDARG0000007951724
nitr1b / nitr1m / novel immune-type receptor 1bENSDARG0000006977324
nitr9 / novel immune-type receptor 9ENSDARG0000002833323
nitr1m / novel immune-type receptor 1mENSDARG0000008763123
CU672228.2 / Danio rerio novel immune-type receptor 1l (nitr1l), mRNA.ENSDARG0000011712523
nitr1k / novel immune-type receptor 1kENSDARG0000011039323
nitr1b / novel immune-type receptor 1bENSDARG0000011514422
CU179759.1 / Danio rerio novel immune-type receptor 1d (nitr1d), mRNA.ENSDARG0000011206522
nitr1b / novel immune-type receptor 1bENSDARG0000006984819
nitr12 / novel immune-type receptor 12ENSDARG0000009862616


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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