ENSDARG00000000529


Danio rerio

Features
Gene ID: ENSDARG00000000529
  
Biological name :ofd1
  
Synonyms : ofd1 / oral-facial-digital syndrome 1
  
Possible biological names infered from orthology : O75665 / OFD1, centriole and centriolar satellite protein
  
Species: Danio rerio
  
Chr. number: 9
Strand: 1
Band:
Gene start: 54716436
Gene end: 54743987
  
Corresponding Affymetrix probe sets: Dr.202.1.S1_at (Zebrafish Array)   NM_001004496_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000000952
NCBI entrez gene - 327216     See in Manteia.
RefSeq - NM_001319208
RefSeq - NM_001004496
RefSeq Peptide - NP_001004496
RefSeq Peptide - NP_001306137
swissprot - F1QL50
ZFIN ID - ZDB-GENE-030131-5427
Ensembl - ENSDARG00000000529
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OFD1ENSGALG00000016576Gallus gallus
 OFD1ENSG00000046651Homo sapiens
 Ofd1ENSMUSG00000040586Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006594  LIS1 homology motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
Regulation of PLK1 Activity at G2/M Transition
Loss of Nlp from mitotic centrosomes
Recruitment of mitotic centrosome proteins and complexes
Loss of proteins required for interphase microtubule organization from the centrosome
Recruitment of NuMA to mitotic centrosomes
Hedgehog off state
Anchoring of the basal body to the plasma membrane
Hedgehog on state
AURKA Activation by TPX2


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000001 Kupffer s vesicle Kupffers vesicle cilium decreased length , abnormal
Kupffers vesicle cilium movement quality , abnormal
Show

 ZFA:0000008 brain brain hydrocephalic , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000132 neural plate neural plate increased width , abnormal
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 ZFA:0000155 somite somite increased width , abnormal
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 ZFA:0001094 whole organism whole organism increased curvature , abnormal
whole organism edematous , abnormal
whole organism decreased length , abnormal
whole organism anterior-posterior axis decreased length , abnormal
Show

 ZFA:0001205 Meckel s cartilage Meckels cartilage morphology , abnormal
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 ZFA:0001261 ventricular system ventricular system dilated , abnormal
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 ZFA:0001284 optic fissure optic fissure closure incomplete , abnormal
optic fissure unfused from optic fissure , abnormal
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 ZFA:0001462 somite border somite border amorphous , abnormal
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 ZFA:0001557 pronephric glomerulus pronephric glomerulus unfused from pronephric glomerulus , abnormal
pronephric glomerulus morphology , abnormal
Show

 ZFA:0001617 otolith otolith increased amount , abnormal
otolith decreased size , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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