ENSDARG00000001777


Danio rerio

Features
Gene ID: ENSDARG00000001777
  
Biological name :nup155
  
Synonyms : nucleoporin 155 / nup155
  
Possible biological names infered from orthology : Nuclear pore complex protein Nup155 / O75694 / Q99P88
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 1597270
Gene end: 1636452
  
Corresponding Affymetrix probe sets: Dr.14749.1.S1_at (Zebrafish Array)   NM_200156_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000114594
Ensembl peptide - ENSDARP00000007708
NCBI entrez gene - 393125     See in Manteia.
RefSeq - NM_200156
RefSeq Peptide - NP_956450
swissprot - F1QE76
swissprot - F1Q953
ZFIN ID - ZDB-GENE-040426-711
Ensembl - ENSDARG00000001777
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NUP155ENSGALG00000003688Gallus gallus
 NUP155ENSG00000113569Homo sapiens
 Nup155ENSMUSG00000022142Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004870  Nucleoporin, Nup155-like
 IPR007187  Nucleoporin, Nup133/Nup155-like, C-terminal
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR014908  Nucleoporin, Nup133/Nup155-like, N-terminal
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000972 transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery IBA
 biological_processGO:0006405 RNA export from nucleus IBA
 biological_processGO:0006606 protein import into nucleus IBA
 biological_processGO:0006913 nucleocytoplasmic transport IEA
 biological_processGO:0036228 protein localization to nuclear inner membrane IBA
 cellular_componentGO:0005643 nuclear pore IDA
 cellular_componentGO:0044611 nuclear pore inner ring IBA
 molecular_functionGO:0017056 structural constituent of nuclear pore IBA


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
Regulation of Glucokinase by Glucokinase Regulatory Protein
snRNP Assembly
SUMOylation of DNA damage response and repair proteins
SUMOylation of ubiquitinylation proteins
Nuclear Pore Complex (NPC) Disassembly
SUMOylation of SUMOylation proteins
SUMOylation of chromatin organization proteins
SUMOylation of RNA binding proteins
Transcriptional regulation by small RNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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