ENSDARG00000002285


Danio rerio

Features
Gene ID: ENSDARG00000002285
  
Biological name :mcoln1a
  
Synonyms : mcoln1a / mucolipin 1a
  
Possible biological names infered from orthology : MCOLN1 / mucolipin 1 / Q99J21 / Q9GZU1
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 45671687
Gene end: 45700574
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000118341
NCBI entrez gene - 406689     See in Manteia.
swissprot - A2BGV1
ZFIN ID - ZDB-GENE-040426-2704
Ensembl - ENSDARG00000002285
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MCOLN1ENSG00000090674Homo sapiens
 Mcoln1ENSMUSG00000004567Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mcoln1b / mucolipin 1b / MCOLN1* / Q9GZU1* / mucolipin 1*ENSDARG0000005884867
mcoln3a / mucolipin 3a / Q8TDD5* / MCOLN3* / Q8R4F0* / mucolipin 3*ENSDARG0000007836345
LO017850.1 / MCOLN3* / Q8TDD5* / mucolipin 3*ENSDARG0000010205044
mcoln2 / mucolipin 2 / Q8IZK6*ENSDARG0000009891832


Protein motifs (from Interpro)
Interpro ID Name
 IPR013122  Polycystin cation channel, PKD1/PKD2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005764 lysosome IDA
 cellular_componentGO:0005770 late endosome IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
TRP channels
Transferrin endocytosis and recycling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain apoptotic process increased occurrence , abnormal
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 ZFA:0000107 eye eye apoptotic process increased occurrence , abnormal
Show

 ZFA:0000640 cornea cornea glycosaminoglycan increased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr