ENSDARG00000003091


Danio rerio

Features
Gene ID: ENSDARG00000003091
  
Biological name :oclnb
  
Synonyms : occludin b / oclnb
  
Possible biological names infered from orthology : occludin / OCLN / Q16625 / Q61146
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 26212621
Gene end: 26220871
  
Corresponding Affymetrix probe sets: Dr.2174.1.A1_at (Zebrafish Array)   NM_001008618_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000116151
Ensembl peptide - ENSDARP00000089285
Ensembl peptide - ENSDARP00000153007
NCBI entrez gene - 494075     See in Manteia.
RefSeq - NM_001008618
RefSeq - XM_005171844
RefSeq Peptide - NP_001008618
swissprot - F1QFR8
swissprot - A2BGQ3
ZFIN ID - ZDB-GENE-041212-43
Ensembl - ENSDARG00000003091
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OCLNENSG00000197822Homo sapiens
 OclnENSMUSG00000021638Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
oclna / occludin a / OCLN* / Q16625* / Q61146* / occludin*ENSDARG0000000510847
si:ch73-61d6.3ENSDARG0000005782633
zgc:154006ENSDARG0000006179731


Protein motifs (from Interpro)
Interpro ID Name
 IPR002958  Occludin
 IPR008253  Marvel domain
 IPR010844  Occludin homology domain
 IPR031176  ELL/occludin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Apoptotic cleavage of cell adhesion proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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