ENSDARG00000005108


Danio rerio

Features
Gene ID: ENSDARG00000005108
  
Biological name :oclna
  
Synonyms : occludin a / oclna
  
Possible biological names infered from orthology : occludin / OCLN / Q16625 / Q61146
  
Species: Danio rerio
  
Chr. number: 10
Strand: -1
Band:
Gene start: 2924775
Gene end: 2943474
  
Corresponding Affymetrix probe sets: Dr.7692.1.A1_at (Zebrafish Array)   NM_212832_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000010183
Ensembl peptide - ENSDARP00000152914
NCBI entrez gene - 405757     See in Manteia.
RefSeq - NM_212832
RefSeq Peptide - NP_997997
swissprot - F1R799
ZFIN ID - ZDB-GENE-040426-2685
Ensembl - ENSDARG00000005108
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 OCLNENSG00000197822Homo sapiens
 OclnENSMUSG00000021638Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
oclnb / occludin b / OCLN* / Q16625* / Q61146* / occludin*ENSDARG0000000309145
si:ch73-61d6.3ENSDARG0000005782635
zgc:154006ENSDARG0000006179730


Protein motifs (from Interpro)
Interpro ID Name
 IPR002958  Occludin
 IPR008253  Marvel domain
 IPR010844  Occludin homology domain
 IPR031176  ELL/occludin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0070830 bicellular tight junction assembly IEA
 cellular_componentGO:0005923 bicellular tight junction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Apoptotic cleavage of cell adhesion proteins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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