ENSDARG00000003693


Danio rerio

Features
Gene ID: ENSDARG00000003693
  
Biological name :hars
  
Synonyms : hars / histidyl-tRNA synthetase
  
Possible biological names infered from orthology : HARS2 / Histidine--tRNA ligase, cytoplasmic / histidyl-tRNA synthetase 2, mitochondrial / P12081 / P49590 / Probable histidine--tRNA ligase, mitochondrial / Q61035 / Q99KK9
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 7377552
Gene end: 7395997
  
Corresponding Affymetrix probe sets: Dr.4161.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000123163
Ensembl peptide - ENSDARP00000113894
NCBI entrez gene - 447847     See in Manteia.
RefSeq - NM_001302256
RefSeq - NM_001302262
RefSeq Peptide - NP_001289185
RefSeq Peptide - NP_001289191
swissprot - E9QI36
swissprot - F1Q5D5
ZFIN ID - ZDB-GENE-040912-152
Ensembl - ENSDARG00000003693
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000029346Gallus gallus
 HARSENSGALG00000035080Gallus gallus
 HARSENSG00000170445Homo sapiens
 HARS2ENSG00000112855Homo sapiens
 HarsENSMUSG00000001380Mus musculus
 Hars2ENSMUSG00000019143Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000738  WHEP-TRS domain
 IPR004154  Anticodon-binding
 IPR004516  Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit
 IPR006195  Aminoacyl-tRNA synthetase, class II
 IPR009068  S15/NS1, RNA-binding
 IPR015807  Histidine-tRNA ligase
 IPR033656  Histidyl-anticodon-binding


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006418 tRNA aminoacylation for protein translation IEA
 biological_processGO:0006427 histidyl-tRNA aminoacylation IEA
 biological_processGO:0032543 mitochondrial translation IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IBA
 molecular_functionGO:0004812 aminoacyl-tRNA ligase activity IEA
 molecular_functionGO:0004821 histidine-tRNA ligase activity IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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