ENSDARG00000003695


Danio rerio

Features
Gene ID: ENSDARG00000003695
  
Biological name :vdac3
  
Synonyms : vdac3 / voltage-dependent anion channel 3
  
Possible biological names infered from orthology : Q60931 / Q9Y277
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 2412583
Gene end: 2434287
  
Corresponding Affymetrix probe sets: Dr.1146.1.A1_at (Zebrafish Array)   NM_213246_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000121437
Ensembl peptide - ENSDARP00000123532
NCBI entrez gene - 406529     See in Manteia.
RefSeq - NM_213246
RefSeq - XM_005166743
RefSeq - XM_005166744
RefSeq Peptide - NP_998411
swissprot - B0R198
swissprot - B0R197
ZFIN ID - ZDB-GENE-040426-2380
Ensembl - ENSDARG00000003695
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000029894Gallus gallus
 VDAC3ENSG00000078668Homo sapiens
 Vdac3ENSMUSG00000008892Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zgc:56235 / VDAC3* / Q60931* / Q9Y277* / voltage dependent anion channel 3*ENSDARG0000011668074
vdac2 / voltage-dependent anion channel 2 / P45880* / Q60930*ENSDARG0000001362369
vdac1 / voltage-dependent anion channel 1 / P21796* / Q60932*ENSDARG0000004513262


Protein motifs (from Interpro)
Interpro ID Name
 IPR001925  Porin, eukaryotic type
 IPR027246  Eukaryotic porin/Tom40
 IPR030271  Voltage-dependent anion-selective channel protein 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015698 inorganic anion transport IEA
 biological_processGO:0031101 fin regeneration IEP
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0098656 anion transmembrane transport IEA
 biological_processGO:1902017 regulation of cilium assembly IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane IEA
 molecular_functionGO:0008308 voltage-gated anion channel activity IEA


Pathways (from Reactome)
Pathway description
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr