ENSDARG00000045132


Danio rerio

Features
Gene ID: ENSDARG00000045132
  
Biological name :vdac1
  
Synonyms : vdac1 / voltage-dependent anion channel 1
  
Possible biological names infered from orthology : P21796 / Q60932
  
Species: Danio rerio
  
Chr. number: 21
Strand: -1
Band:
Gene start: 45190582
Gene end: 45210092
  
Corresponding Affymetrix probe sets: Dr.19223.2.S1_at (Zebrafish Array)   NM_001001404_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000066372
NCBI entrez gene - 334582     See in Manteia.
RefSeq - NM_001001404
RefSeq Peptide - NP_001001404
swissprot - Q6NWC1
ZFIN ID - ZDB-GENE-030131-6514
Ensembl - ENSDARG00000045132
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VDAC1ENSGALG00000006503Gallus gallus
 VDAC1ENSG00000213585Homo sapiens
 Vdac1ENSMUSG00000020402Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vdac2 / voltage-dependent anion channel 2 / P45880* / Q60930*ENSDARG0000001362375
vdac3 / voltage-dependent anion channel 3 / Q60931* / Q9Y277*ENSDARG0000000369570
zgc:56235 / VDAC3* / Q60931* / Q9Y277* / voltage dependent anion channel 3*ENSDARG0000011668067


Protein motifs (from Interpro)
Interpro ID Name
 IPR001925  Porin, eukaryotic type
 IPR027246  Eukaryotic porin/Tom40
 IPR030270  Voltage-dependent anion-selective channel protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006820 anion transport IEA
 biological_processGO:0015698 inorganic anion transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0098656 anion transmembrane transport IEA
 cellular_componentGO:0005741 mitochondrial outer membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008308 voltage-gated anion channel activity IEA


Pathways (from Reactome)
Pathway description
Pink/Parkin Mediated Mitophagy
Ub-specific processing proteases
Pyruvate metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism decreased amount , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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