ENSDARG00000116680


Danio rerio

Features
Gene ID: ENSDARG00000116680
  
Biological name :zgc:56235
  
Synonyms : zgc:56235
  
Possible biological names infered from orthology : Q60931 / Q9Y277 / VDAC3 / voltage dependent anion channel 3
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 3299829
Gene end: 3322338
  
Corresponding Affymetrix probe sets: Dr.17310.1.S1_at (Zebrafish Array)   Dr.26263.1.A1_at (Zebrafish Array)   NM_200217_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000149044
NCBI entrez gene - 393186     See in Manteia.
RefSeq - NM_200217
RefSeq Peptide - NP_956511
swissprot - Q7ZV39
ZFIN ID - ZDB-GENE-040426-954
Ensembl - ENSDARG00000116680
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000029894Gallus gallus
 VDAC3ENSG00000078668Homo sapiens
 Vdac3ENSMUSG00000008892Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vdac3 / voltage-dependent anion channel 3 / Q60931* / Q9Y277*ENSDARG0000000369584
vdac2 / voltage-dependent anion channel 2 / P45880* / Q60930*ENSDARG0000001362378
vdac1 / voltage-dependent anion channel 1 / P21796* / Q60932*ENSDARG0000004513268


Protein motifs (from Interpro)
Interpro ID Name
 IPR001925  Porin, eukaryotic type
 IPR027246  Eukaryotic porin/Tom40
 IPR030271  Voltage-dependent anion-selective channel protein 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015698 inorganic anion transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0098656 anion transmembrane transport IEA
 biological_processGO:1902017 regulation of cilium assembly IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane IEA
 molecular_functionGO:0008308 voltage-gated anion channel activity IEA


Pathways (from Reactome)
Pathway description
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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