ENSDARG00000003829


Danio rerio

Features
Gene ID: ENSDARG00000003829
  
Biological name :galnt2
  
Synonyms : galnt2 / UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2
  
Possible biological names infered from orthology : Gm20388 / polypeptide N-acetylgalactosaminyltransferase 2 / Polypeptide N-acetylgalactosaminyltransferase 2 Polypeptide N-acetylgalactosaminyltransferase 2 soluble form / predicted gene 20388 / Q10471 / Q6PB93
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 24068577
Gene end: 24218795
  
Corresponding Affymetrix probe sets: Dr.12023.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000116568
NCBI entrez gene - 570248     See in Manteia.
RefSeq - NM_001128351
RefSeq - XM_009307348
RefSeq Peptide - NP_001121823
swissprot - B0V0U4
ZFIN ID - ZDB-GENE-041111-110
Ensembl - ENSDARG00000003829
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GALNT2ENSGALG00000011106Gallus gallus
 GALNT2ENSG00000143641Homo sapiens
 Galnt2ENSMUSG00000089704Mus musculus
 Q6PB93ENSMUSG00000092329Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
galnt16 / UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 16 / Q8N428* / Q9JJ61* / polypeptide N-acetylgalactosaminyltransferase 16*ENSDARG0000005319049
galnt14 / UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14 (GalNAc-T14) / Q96FL9* / polypeptide N-acetylgalactosaminyltransferase 14*ENSDARG0000002344848
galnt1 / UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 / Q10472* / O08912* / polypeptide N-acetylgalactosaminyltransferase 1* / Polypeptide N-acetylgala...ENSDARG0000006133540
galnt13 / UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13 / Q8CF93* / Q8IUC8* / polypeptide N-acetylgalactosaminyltransferase 13*ENSDARG0000009922740
galnt11 / UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) / Q8NCW6* / Q921L8* / polypeptide N-acetylgalactosaminyltransferase 11*ENSDARG0000006363639
galnt6 / UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6 (GalNAc-T6) / Q8C7U7* / Q8NCL4* / polypeptide N-acetylgalactosaminyltransferase 6*ENSDARG0000001438638
GALNT3 / polypeptide N-acetylgalactosaminyltransferase 3 / Q14435*ENSDARG0000010864938
poc1bl / POC1 centriolar protein homolog B (Chlamydomonas), like / Q8N4A0* / GALNT4* / O08832* / POC1B-GALNT4* / POC1B-GALNT4 readthrough* / polypeptide N-acetylgalactosaminyltransferase 4*ENSDARG0000001274537
galnt12 / UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 12 / Q8BGT9* / Q8IXK2* / polypeptide N-acetylgalactosaminyltransferase 12*ENSDARG0000005549035


Protein motifs (from Interpro)
Interpro ID Name
 IPR000772  Ricin B, lectin domain
 IPR001173  Glycosyltransferase 2-like
 IPR029044  Nucleotide-diphospho-sugar transferases


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
COPI-independent Golgi-to-ER retrograde traffic
O-linked glycosylation of mucins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000079496 bicd1a / bicaudal D homolog 1a / BICD1* / Q8BR07* / Q96G01* / BICD cargo adaptor 1* / Protein bicaudal D homolog 1 *  / complex / reaction
 ENSDARG00000103714 rab6a / RAB6A, member RAS oncogene family / RAB6C* / RAB6D* / P20340* / Q9H0N0* / P35279* / RAB6C, member RAS oncogene family* / RAB6D, member RAS oncogene family*  / reaction / complex






 

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