ENSDARG00000003925


Danio rerio

Features
Gene ID: ENSDARG00000003925
  
Biological name :cx28.6
  
Synonyms : connexin 28.6 / cx28.6
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 14711765
Gene end: 14712599
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000020177
NCBI entrez gene - 404728     See in Manteia.
swissprot - F1QZN0
ZFIN ID - ZDB-GENE-040406-4
Ensembl - ENSDARG00000003925
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cx30.9 / connexin 30.9ENSDARG0000007036261
cx35.4 / connexin 35.4 / GJB3* / P28231* / O75712* / gap junction protein beta 3*ENSDARG0000004286655
cx34.4 / connexin 34.4 / GJB4* / GJB5* / Q9NTQ9* / O95377* / Q02738* / Q02739* / gap junction protein beta 4* / gap junction protein beta 5*ENSDARG0000007585455
cx28.8 / connexin 28.8 / GJB7* / Q6PEY0* / gap junction protein beta 7*ENSDARG0000007104244
cx31.7 / connexin 31.7 / GJB1* / P28230* / P08034* / gap junction protein beta 1*ENSDARG0000005806443
cx30.3 / connexin 30.3 / GJB2* / GJB6* / Q00977* / O95452* / P29033* / P70689* / gap junction protein beta 2* / gap junction protein beta 6*ENSDARG0000004270743
cx27.5 / connexin 27.5 / GJB1* / P28230* / P08034* / gap junction protein beta 1*ENSDARG0000003555341
GJD4 / gap junction protein delta 4 / Q96KN9*ENSDARG0000011689527


Protein motifs (from Interpro)
Interpro ID Name
 IPR000500  Connexin
 IPR013092  Connexin, N-terminal
 IPR017990  Connexin, conserved site
 IPR019570  Gap junction protein, cysteine-rich domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007154 cell communication IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005921 gap junction IEA
 cellular_componentGO:0005922 connexin complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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