ENSDARG00000071042


Danio rerio

Features
Gene ID: ENSDARG00000071042
  
Biological name :cx28.8
  
Synonyms : connexin 28.8 / cx28.8
  
Possible biological names infered from orthology : gap junction protein beta 7 / GJB7 / Q6PEY0
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 190028
Gene end: 194622
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000104801
Ensembl peptide - ENSDARP00000150825
Ensembl peptide - ENSDARP00000153762
NCBI entrez gene - 566668     See in Manteia.
RefSeq - NM_001025544
RefSeq Peptide - NP_001020715
RefSeq Peptide - NP_001038704
swissprot - Q5SNV2
ZFIN ID - ZDB-GENE-050616-1
Ensembl - ENSDARG00000071042
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GJB7ENSG00000164411Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cx34.4 / connexin 34.4 / GJB4* / GJB5* / Q9NTQ9* / O95377* / Q02738* / Q02739* / gap junction protein beta 4* / gap junction protein beta 5*ENSDARG0000007585448
cx35.4 / connexin 35.4 / GJB3* / P28231* / O75712* / gap junction protein beta 3*ENSDARG0000004286647
cx30.9 / connexin 30.9ENSDARG0000007036245
cx31.7 / connexin 31.7 / GJB1* / P28230* / P08034* / gap junction protein beta 1*ENSDARG0000005806444
cx28.6 / connexin 28.6ENSDARG0000000392543
cx27.5 / connexin 27.5 / GJB1* / P28230* / P08034* / gap junction protein beta 1*ENSDARG0000003555343
cx30.3 / connexin 30.3 / GJB2* / GJB6* / Q00977* / O95452* / P29033* / P70689* / gap junction protein beta 2* / gap junction protein beta 6*ENSDARG0000004270742
GJD4 / gap junction protein delta 4 / Q96KN9*ENSDARG0000011689528


Protein motifs (from Interpro)
Interpro ID Name
 IPR000500  Connexin
 IPR013092  Connexin, N-terminal
 IPR017990  Connexin, conserved site
 IPR019570  Gap junction protein, cysteine-rich domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007154 cell communication IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005921 gap junction IEA
 cellular_componentGO:0005922 connexin complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030054 cell junction IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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