ENSDARG00000004037


Danio rerio

Features
Gene ID: ENSDARG00000004037
  
Biological name :cog2
  
Synonyms : cog2 / component of oligomeric golgi complex 2
  
Possible biological names infered from orthology : Conserved oligomeric Golgi complex subunit 2 / Q14746 / Q921L5
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 23996070
Gene end: 24018916
  
Corresponding Affymetrix probe sets: Dr.9055.1.S1_at (Zebrafish Array)   NM_213354_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000024817
NCBI entrez gene - 406663     See in Manteia.
RefSeq - NM_213354
RefSeq Peptide - NP_998519
swissprot - Q6ZM82
ZFIN ID - ZDB-GENE-040426-2671
Ensembl - ENSDARG00000004037
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 COG2ENSGALG00000011114Gallus gallus
 COG2ENSG00000135775Homo sapiens
 Cog2ENSMUSG00000031979Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009316  COG complex component, COG2
 IPR024602  Conserved oligomeric Golgi complex, subunit 2, N-terminal
 IPR024603  COG complex component, COG2, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006891 intra-Golgi vesicle-mediated transport IBA
 biological_processGO:0007030 Golgi organization IEA
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0017119 Golgi transport complex IBA
 molecular_functionGO:0008565 protein transporter activity IBA


Pathways (from Reactome)
Pathway description
COPI-mediated anterograde transport
Intra-Golgi traffic
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr