ENSG00000135775


Homo sapiens

Features
Gene ID: ENSG00000135775
  
Biological name :COG2
  
Synonyms : COG2 / component of oligomeric golgi complex 2 / Q14746
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q42.2
Gene start: 230642489
Gene end: 230693982
  
Corresponding Affymetrix probe sets: 203073_at (Human Genome U133 Plus 2.0 Array)   243608_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000355628
Ensembl peptide - ENSP00000476305
Ensembl peptide - ENSP00000440349
Ensembl peptide - ENSP00000355629
NCBI entrez gene - 22796     See in Manteia.
OMIM - 606974
RefSeq - NM_001145036
RefSeq - NM_007357
RefSeq Peptide - NP_001138508
RefSeq Peptide - NP_031383
swissprot - V9GY21
swissprot - B1ALW7
swissprot - Q14746
swissprot - B7Z2Y2
Ensembl - ENSG00000135775
  
Related genetic diseases (OMIM): 617395 - ?Congenital disorder of glycosylation, type IIq, 617395
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cog2ENSDARG00000004037Danio rerio
 COG2ENSGALG00000011114Gallus gallus
 Cog2ENSMUSG00000031979Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009316  COG complex component, COG2
 IPR024602  Conserved oligomeric Golgi complex, subunit 2, N-terminal
 IPR024603  COG complex component, COG2, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport TAS
 biological_processGO:0006891 intra-Golgi vesicle-mediated transport IMP
 biological_processGO:0007030 Golgi organization IEA
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005795 Golgi stack IDA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0017119 Golgi transport complex IMP
 cellular_componentGO:0032588 trans-Golgi network membrane TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008565 protein transporter activity IMP


Pathways (from Reactome)
Pathway description
COPI-mediated anterograde transport
Intra-Golgi traffic
Retrograde transport at the Trans-Golgi-Network


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001410 Decreased liver function 
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 HP:0001433 Hepatosplenomegaly 
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002506 Diffuse cerebral atrophy 
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 HP:0002510 Spastic tetraplegia "Spastic paralysis affecting all four limbs." [HPO:curators]
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 HP:0002910 Elevated transaminases "Elevations of the levels of SGOT and SGPT in the serum. SGOT (serum glutamic oxaloacetic transaminase) and SGPT (serum glutamic pyruvic transaminase) are transaminases primarily found in the liver and heart and are released into the bloodstream as the result of liver or heart damage. SGOT and SGPT are used clinically mainly as markers of liver damage." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0005484 Microcephaly, postnatal 
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 HP:0010818 Tonic seizures "A type of `seizure` (HP:0001250) characterized by a sudden increase in muscle tone whereby the body, arms, or legs make sudden stiffening movements and consciousness is usually preserved. Tonic seizures can occur during sleep. Tonic seizures usually affect both sides of the body, and cause a fall if the affected person was standing when the seizure started." [HPO:probinson]
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 HP:0010837 Decreased serum ceruloplasmin "A kind of `Abnormality of copper homeostasis` (HP:0010836) related to a `decreased concentration` (PATO:0001163) of `ceruloplasmin` (PR:000005794) in the `blood` (FMA:9670)." [HPO:probinson]
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 HP:0011967 Hypocupremia "A reduced concentration of `copper` (CHEBI:28694) in the `blood` (FMA:9670)." [HPO:probinson]
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 HP:0012506 Small pituitary gland "An abnormally decreased size of the `pituitary gland` (FMA:13889)." [ORCID:0000-0001-5208-3432]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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