ENSDARG00000005513


Danio rerio

Features
Gene ID: ENSDARG00000005513
  
Biological name :naca
  
Synonyms : naca / nascent polypeptide-associated complex alpha subunit / Q8JIU7
  
Possible biological names infered from orthology : E9PAV3 / NACA2 / nascent polypeptide associated complex alpha subunit 2 / Nascent polypeptide-associated complex subunit alpha, muscle-specific form / P70670 / Q13765 / Q60817 / Q9H009
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 17865554
Gene end: 17876777
  
Corresponding Affymetrix probe sets: Dr.4412.1.S1_at (Zebrafish Array)   NM_173264_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000112826
Ensembl peptide - ENSDARP00000153876
Ensembl peptide - ENSDARP00000136310
Ensembl peptide - ENSDARP00000121027
Ensembl peptide - ENSDARP00000025953
NCBI entrez gene - 195823     See in Manteia.
RefSeq - NM_173264
RefSeq Peptide - NP_775371
swissprot - A0A0R4IQN8
swissprot - F1RE85
swissprot - Q8JIU7
swissprot - E9QCS9
swissprot - B2GPE2
ZFIN ID - ZDB-GENE-020423-4
Ensembl - ENSDARG00000005513
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NACAENSGALG00000033609Gallus gallus
 NACAENSG00000196531Homo sapiens
 NACA2ENSG00000253506Homo sapiens
 NacaENSMUSG00000061315Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nacad / NAC alpha domain containing / O15069* / Q5SWP3* / NAC-alpha domain-containing protein 1 *ENSDARG0000001234760


Protein motifs (from Interpro)
Interpro ID Name
 IPR002715  Nascent polypeptide-associated complex NAC domain
 IPR016641  Nascent polypeptide-associated complex subunit alpha


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0030239 myofibril assembly IMP
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005854 nascent polypeptide-associated complex IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain necrotic , abnormal
Show

 ZFA:0000054 pericardium pericardium edematous , abnormal
Show

 ZFA:0000084 yolk yolk grey , abnormal
yolk swollen , abnormal
yolk circular , abnormal
Show

 ZFA:0000107 eye eye iridophore disorganized , abnormal
Show

 ZFA:0000114 heart heart quality , abnormal
heart edematous , abnormal
Show

 ZFA:0000151 pronephros pronephros absent , abnormal
Show

 ZFA:0001078 thymus thymus absent , abnormal
thymus lymphoid progenitor cell absent , abnormal
thymus lacks all parts of type lymphoid progenitor cell , abnormal
Show

 ZFA:0001094 whole organism whole organism viability , abnormal
whole organism dead , abnormal
whole organism paralysed , abnormal
whole organism posterior side absent , abnormal
whole organism decreased life span , abnormal
whole organism increased amount , abnormal
Show

 ZFA:0001114 head head necrotic , abnormal
head decreased size , abnormal
Show

 ZFA:0001115 trunk trunk necrotic , abnormal
trunk bent , abnormal
trunk curved ventral , abnormal
Show

 ZFA:0001227 mandibular arch skeleton mandibular arch skeleton aplastic , abnormal
Show

 ZFA:0001273 ventral mandibular arch ventral mandibular arch immature , abnormal
Show

 ZFA:0001286 caudal vein plexus caudal vein plexus decreased thickness , abnormal
caudal vein plexus stromal cell apoptotic , abnormal
caudal vein plexus has fewer parts of type hematopoietic stem cell , abnormal
Show

 ZFA:0005023 hematopoietic system hematopoietic system cell death occurrence , ameliorated
hematopoietic system cell death increased occurrence , abnormal
Show

 ZFA:0009014 hematopoietic stem cell hematopoietic stem cell absent , abnormal
hematopoietic stem cell amount , ameliorated
hematopoietic stem cell decreased amount , abnormal
Show

 ZFA:0009048 granulocyte granulocyte absent , abnormal
granulocyte decreased amount , abnormal
Show

 ZFA:0009116 slow muscle cell slow muscle cell myofibril disorganized , abnormal
Show

 ZFA:0009117 fast muscle cell fast muscle cell myofibril disorganized , abnormal
fast muscle cell sarcomere decreased amount , abnormal
Show

 ZFA:0009256 nucleate erythrocyte nucleate erythrocyte decreased amount , abnormal
Show

 ZFA:0009325 erythroid lineage cell erythroid lineage cell decreased amount , abnormal
Show

 ZFA:0009327 neutrophil neutrophil mislocalised , abnormal
neutrophil decreased amount , abnormal
Show

 ZFA:0009354 hematopoietic multipotent progenitor cell hematopoietic multipotent progenitor cell decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr