ENSDARG00000005561


Danio rerio

Features
Gene ID: ENSDARG00000005561
  
Biological name :gfm2
  
Synonyms : A0JMI9 / G elongation factor, mitochondrial 2 / gfm2
  
Possible biological names infered from orthology : Q8R2Q4 / Q969S9 / Ribosome-releasing factor 2, mitochondrial
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 34578479
Gene end: 34600710
  
Corresponding Affymetrix probe sets: Dr.22910.1.A1_at (Zebrafish Array)   NM_001077545_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000006504
NCBI entrez gene - 558184     See in Manteia.
RefSeq - NM_001077545
RefSeq Peptide - NP_001071013
swissprot - A0JMI9
ZFIN ID - ZDB-GENE-060201-3
Ensembl - ENSDARG00000005561
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GFM2ENSGALG00000014939Gallus gallus
 GFM2ENSG00000164347Homo sapiens
 Gfm2ENSMUSG00000021666Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000640  Elongation factor EFG, domain V-like
 IPR000795  Transcription factor, GTP-binding domain
 IPR004161  Translation elongation factor EFTu-like, domain 2
 IPR005225  Small GTP-binding protein domain
 IPR005517  Translation elongation factor EFG/EF2, domain IV
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR009022  Elongation factor G, domain III
 IPR014721  Ribosomal protein S5 domain 2-type fold, subgroup
 IPR020568  Ribosomal protein S5 domain 2-type fold
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030851  Ribosome-releasing factor 2, mitochondrial
 IPR031157  Tr-type G domain, conserved site
 IPR035647  EF-G domain III/V-like
 IPR035649  EFG, domain V


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0032543 mitochondrial translation ISS
 biological_processGO:0032790 ribosome disassembly ISS
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity ISS
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Mitochondrial translation termination


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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