ENSDARG00000005673


Danio rerio

Features
Gene ID: ENSDARG00000005673
  
Biological name :f3b
  
Synonyms : coagulation factor IIIb / f3b
  
Possible biological names infered from orthology : coagulation factor III, tissue factor / F3 / P13726
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 15100742
Gene end: 15106968
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000002953
NCBI entrez gene - 550423     See in Manteia.
RefSeq - NM_001017728
RefSeq Peptide - NP_001017728
swissprot - B0UY88
ZFIN ID - ZDB-GENE-050417-234
Ensembl - ENSDARG00000005673
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000005619Gallus gallus
 F3ENSG00000117525Homo sapiens
 F3ENSMUSG00000028128Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
f3a / coagulation factor IIIa / F3* / P13726* / coagulation factor III, tissue factor*ENSDARG0000009912438


Protein motifs (from Interpro)
Interpro ID Name
 IPR001187  Tissue factor
 IPR003961  Fibronectin type III
 IPR013783  Immunoglobulin-like fold
 IPR015373  Interferon/interleukin receptor domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001944 vasculature development IMP
 biological_processGO:0007596 blood coagulation IEA
 biological_processGO:0019221 cytokine-mediated signaling pathway IBA
 cellular_componentGO:0005886 plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IBA
 molecular_functionGO:0004896 cytokine receptor activity IBA


Pathways (from Reactome)
Pathway description
Extrinsic Pathway of Fibrin Clot Formation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain hemorrhagic , abnormal
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 ZFA:0000033 intermediate cell mass of mesoderm intermediate cell mass of mesoderm decreased size , abnormal
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 ZFA:0000056 pharynx pharynx hemorrhagic , abnormal
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 ZFA:0000110 fourth ventricle fourth ventricle edematous , abnormal
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 ZFA:0001267 cranial vasculature cranial vasculature morphology , abnormal
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 ZFA:0005249 vasculature vasculature morphology , abnormal
vasculature hemorrhagic , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000034718 tfpia / tissue factor pathway inhibitor a / TFPI* / P10646* / O54819* / tissue factor pathway inhibitor*  / reaction / complex
 ENSDARG00000100782 zgc:163025 / F7 (1 of many) / F7* / P08709* / P70375* / coagulation factor VII* / Coagulation factor VII Factor VII light chain Factor VII heavy chain*  / complex / reaction
 ENSDARG00000010097 f9a / coagulation factor IXa / F9* / P16294* / P00740* / coagulation factor IX* / Coagulation factor IX Coagulation factor IXa light chain Coagulation factor IXa heavy chain*  / reaction
 ENSDARG00000088581 f10 / coagulation factor X / O88947* / P00742* / Coagulation factor X Factor X light chain Factor X heavy chain Activated factor Xa heavy chain*  / reaction / complex
 ENSDARG00000029493 f9b / coagulation factor IXb / F9* / P16294* / P00740* / coagulation factor IX* / Coagulation factor IX Coagulation factor IXa light chain Coagulation factor IXa heavy chain*  / reaction






 

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