ENSDARG00000005972


Danio rerio

Features
Gene ID: ENSDARG00000005972
  
Biological name :ric8b
  
Synonyms : ric8b / RIC8 guanine nucleotide exchange factor B
  
Possible biological names infered from orthology : Q80XE1 / Q9NVN3 / Synembryn-B
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 15287065
Gene end: 15329471
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000012229
Ensembl peptide - ENSDARP00000151115
NCBI entrez gene - 334503     See in Manteia.
RefSeq - NM_001005293
RefSeq Peptide - NP_001005293
swissprot - Q1LWD2
ZFIN ID - ZDB-GENE-030131-6435
Ensembl - ENSDARG00000005972
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RIC8BENSGALG00000029484Gallus gallus
 RIC8BENSG00000111785Homo sapiens
 Ric8bENSMUSG00000035620Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ric8a / RIC8 guanine nucleotide exchange factor A / Q3TIR3* / Q9NPQ8* / Synembryn-A *ENSDARG0000000724749
si:ch211-195b15.7ENSDARG0000001757946
si:dkey-94f20.4ENSDARG0000001692321


Protein motifs (from Interpro)
Interpro ID Name
 IPR008376  Synembryn
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR019318  Guanine nucleotide exchange factor, Ric8


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000095 pharyngeal arch 3-7 skeleton pharyngeal arch 3-7 skeleton quality , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000368 integument integument melanocyte morphology , abnormal
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 ZFA:0001114 head head circular , abnormal
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 ZFA:0001115 trunk trunk decreased pigmentation , abnormal
trunk melanocyte aggregated , abnormal
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 ZFA:0001227 mandibular arch skeleton mandibular arch skeleton increased thickness , abnormal
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 ZFA:0009091 melanocyte melanocyte irregular spatial pattern , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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