ENSDARG00000006332


Danio rerio

Features
Gene ID: ENSDARG00000006332
  
Biological name :snx14
  
Synonyms : Q5PNP1 / snx14 / sorting nexin 14
  
Possible biological names infered from orthology : Q8BHY8 / Q9Y5W7
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 851583
Gene end: 894374
  
Corresponding Affymetrix probe sets: Dr.25742.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000095495
Ensembl peptide - ENSDARP00000015158
Ensembl peptide - ENSDARP00000119620
NCBI entrez gene - 555970     See in Manteia.
RefSeq - NM_001044793
RefSeq - XM_005160316
RefSeq Peptide - NP_001038258
swissprot - F1QJC7
swissprot - E9QIC3
swissprot - Q5PNP1
ZFIN ID - ZDB-GENE-040724-144
Ensembl - ENSDARG00000006332
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNX14ENSGALG00000015831Gallus gallus
 SNX14ENSG00000135317Homo sapiens
 Snx14ENSMUSG00000032422Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
snx13 / sorting nexin 13 / Q9Y5W8*ENSDARG0000001382818
snx25 / sorting nexin 25 / Q3ZT31* / Q9H3E2*ENSDARG0000009954517


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR003114  Phox-associated domain
 IPR013937  Sorting nexin, C-terminal
 IPR016137  RGS domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006914 autophagy IMP
 biological_processGO:0021680 cerebellar Purkinje cell layer development IMP
 biological_processGO:0030902 hindbrain development IMP
 biological_processGO:0097352 autophagosome maturation IMP
 cellular_componentGO:0005764 lysosome ISS
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005770 late endosome ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA
 molecular_functionGO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000029 hindbrain hindbrain decreased area , abnormal
Show

 ZFA:0000107 eye eye decreased width , abnormal
Show

 ZFA:0000445 optic tectum optic tectum decreased width , abnormal
Show

 ZFA:0009071 Purkinje cell Purkinje cell decreased amount , abnormal
Show

 ZFA:0009248 neuron neuron apoptotic , abnormal
neuron autophagosome increased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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