ENSG00000135317


Homo sapiens

Features
Gene ID: ENSG00000135317
  
Biological name :SNX14
  
Synonyms : Q9Y5W7 / SNX14 / sorting nexin 14
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: q14.3
Gene start: 85505496
Gene end: 85594156
  
Corresponding Affymetrix probe sets: 225101_s_at (Human Genome U133 Plus 2.0 Array)   230759_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000420938
Ensembl peptide - ENSP00000391981
Ensembl peptide - ENSP00000422814
Ensembl peptide - ENSP00000427380
Ensembl peptide - ENSP00000426806
Ensembl peptide - ENSP00000425630
Ensembl peptide - ENSP00000425387
Ensembl peptide - ENSP00000424302
Ensembl peptide - ENSP00000257769
Ensembl peptide - ENSP00000313121
Ensembl peptide - ENSP00000358641
Ensembl peptide - ENSP00000358649
NCBI entrez gene - 57231     See in Manteia.
OMIM - 616105
RefSeq - XM_017011101
RefSeq - NM_020468
RefSeq - NM_153816
RefSeq - XM_005248738
RefSeq - XM_005248740
RefSeq - XM_011535977
RefSeq - XM_011535979
RefSeq - XM_017011090
RefSeq - XM_017011091
RefSeq - XM_017011092
RefSeq - XM_017011093
RefSeq - XM_017011094
RefSeq - XM_017011095
RefSeq - XM_017011096
RefSeq - XM_017011097
RefSeq - XM_017011098
RefSeq - XM_017011099
RefSeq - XM_017011100
RefSeq - NM_001297614
RefSeq - NM_001304479
RefSeq - NM_001350533
RefSeq - NM_001350539
RefSeq - NM_001350549
RefSeq - NM_001350550
RefSeq Peptide - NP_001337462
RefSeq Peptide - NP_001337468
RefSeq Peptide - NP_001337478
RefSeq Peptide - NP_001337479
RefSeq Peptide - NP_065201
RefSeq Peptide - NP_722523
RefSeq Peptide - NP_001284543
RefSeq Peptide - NP_001291408
swissprot - Q9Y5W7
swissprot - D6RBA7
swissprot - D6RJG9
swissprot - D6REK1
swissprot - D6RDH9
swissprot - D6RDA6
swissprot - H0Y926
swissprot - E2QRM8
swissprot - Q5JRQ0
Ensembl - ENSG00000135317
  
Related genetic diseases (OMIM): 616354 - Spinocerebellar ataxia, autosomal recessive 20, 616354
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx14ENSDARG00000006332Danio rerio
 SNX14ENSGALG00000015831Gallus gallus
 Snx14ENSMUSG00000032422Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNX13 / Q9Y5W8 / sorting nexin 13ENSG0000007118919
SNX25 / Q9H3E2 / sorting nexin 25ENSG0000010976217


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR003114  Phox-associated domain
 IPR013937  Sorting nexin, C-terminal
 IPR016137  RGS domain
 IPR036305  RGS domain superfamily
 IPR036871  PX domain superfamily
 IPR037436  Sorting nexin-14, PX domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0097352 autophagosome maturation IMP
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005770 late endosome IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0031902 late endosome membrane IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA
 molecular_functionGO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000158 Macroglossia "Increased length and width of the tongue." [pmid:19125428]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000280 Coarse facial features 
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 HP:0000283 Broad face 
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000289 Wide philtrum 
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 HP:0000343 Long philtrum 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000678 Dental overcrowding 
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 HP:0000684 Delayed dentition "Delayed eruption of teeth." [HPO:curators]
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 HP:0000729 Pervasive developmental disorder 
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 HP:0000998 Hypertrichosis "Hypertrichosis is increased hair growth that is abnormal in quantity or location." [HPO:curators]
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 HP:0001156 Brachydactyly 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001272 Cerebellar atrophy 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002186 Apraxia "A defect in the understanding of complex motor commands and in the execution of certain learned movements, i.e., deficits in the cognitive components of learned movements." [HPO:curators]
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 HP:0002540 Inability to walk 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0004482 Relative macrocephaly "A relatively mild degree of macrocephaly in which the head circumference is not above two standard deviations from the mean, but appears dysproportionately large when other factors such as body stature are taken into account." [HPO:curators]
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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 HP:0012385 Camptodactyly "The distal interphalangeal joint and/or the proximal interphalangeal joint of the fingers or toes cannot be extended to 180 degrees by either active or passive extension." [HPO:probinson]
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 HP:0012471 Thick vermilion border "Increased width of the "skin of vermilion border region of upper lip" (FMA:312645)." [HPO:probinson]
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 HP:0012745 Short palpebral fissure "Distance between the medial and lateral canthi is more than 2 SD below the mean for age (objective); or, apparently reduced length of the palpebral fissures." [pmid:19125427]
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 HP:0012810 Wide nasal base "Increased distance between the attachments of the alae nasi to the face." [HPO:probinson, pmid:19152422]
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 HP:0030084 Clinodactyly "An angulation of a digit at an interphalangeal joint in the plane of the palm (finger) or sole (toe)." [pmid:16252026]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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