ENSDARG00000006422


Danio rerio

Features
Gene ID: ENSDARG00000006422
  
Biological name :esyt3
  
Synonyms : esyt3 / extended synaptotagmin-like protein 3
  
Possible biological names infered from orthology : A0FGR9 / extended synaptotagmin 3 / Q5DTI8
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 23783856
Gene end: 23807032
  
Corresponding Affymetrix probe sets: Dr.15878.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000010917
NCBI entrez gene - 553238     See in Manteia.
RefSeq - NM_001123233
RefSeq Peptide - NP_001116705
swissprot - B0UYL4
ZFIN ID - ZDB-GENE-050809-35
Ensembl - ENSDARG00000006422
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ESYT3ENSGALG00000012092Gallus gallus
 ESYT3ENSG00000158220Homo sapiens
 Esyt3ENSMUSG00000037681Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
esyt2a / extended synaptotagmin-like protein 2a / ESYT2* / A0FGR8* / Q3TZZ7* / extended synaptotagmin 2*ENSDARG0000003082435
esyt1b / extended synaptotagmin-like protein 1b / ESYT1* / Q9BSJ8* / Q3U7R1* / extended synaptotagmin 1*ENSDARG0000001423935
esyt2b / extended synaptotagmin-like protein 2b / ESYT2* / A0FGR8* / Q3TZZ7* / extended synaptotagmin 2*ENSDARG0000007896434
esyt1a / extended synaptotagmin-like protein 1a / ESYT1* / Q9BSJ8* / Q3U7R1* / extended synaptotagmin 1*ENSDARG0000003471431
mctp1a / multiple C2 domains, transmembrane 1a / MCTP1* / Q6DN14* / multiple C2 and transmembrane domain containing 1*ENSDARG0000007640412
mctp1b / multiple C2 domains, transmembrane 1b / MCTP1* / E9PV86* / Q6DN14* / multiple C2 and transmembrane domain containing 1* / Multiple C2 and transmembrane domain-containing protein 1 *ENSDARG0000006087112
mctp2a / multiple C2 domains, transmembrane 2a / MCTP2* / Q6DN12* / Q5RJH2* / multiple C2 and transmembrane domain containing 2* / Multiple C2 and transmembrane domain-containing protein 2 *ENSDARG0000000141410
mctp2b / multiple C2 domains, transmembrane 2b / MCTP2* / Q6DN12* / multiple C2 and transmembrane domain containing 2*ENSDARG0000007397010


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR031468  Synaptotagmin-like mitochondrial-lipid-binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006869 lipid transport IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0061817 endoplasmic reticulum-plasma membrane tethering IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031227 intrinsic component of endoplasmic reticulum membrane IBA
 cellular_componentGO:0044232 organelle membrane contact site IBA
 molecular_functionGO:0008289 lipid binding IEA


Pathways (from Reactome)
Pathway description
Glycosphingolipid metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr