ENSDARG00000007323


Danio rerio

Features
Gene ID: ENSDARG00000007323
  
Biological name :chmp4bb
  
Synonyms : charged multivesicular body protein 4Bb / chmp4bb / Q6IQ73
  
Possible biological names infered from orthology : charged multivesicular body protein 4B / CHMP4B / Q9D8B3 / Q9H444
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 45361735
Gene end: 45375108
  
Corresponding Affymetrix probe sets: Dr.16859.1.S1_at (Zebrafish Array)   NM_213457_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000023938
Ensembl peptide - ENSDARP00000124234
NCBI entrez gene - 406766     See in Manteia.
RefSeq - NM_213457
RefSeq Peptide - NP_998622
swissprot - F8W4C9
swissprot - Q6IQ73
ZFIN ID - ZDB-GENE-040426-2812
Ensembl - ENSDARG00000007323
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHMP4BENSGALG00000002095Gallus gallus
 CHMP4BENSG00000101421Homo sapiens
 Chmp4bENSMUSG00000038467Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chmp4ba / charged multivesicular body protein 4Ba / CHMP4B* / Q9H444* / charged multivesicular body protein 4B*ENSDARG0000001625581
chmp4c / charged multivesicular body protein 4C / Q96CF2* / Q9D7F7*ENSDARG0000000741863


Protein motifs (from Interpro)
Interpro ID Name
 IPR005024  Snf7 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007034 vacuolar transport IEA
 biological_processGO:0009838 abscission ISS
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0032466 negative regulation of cytokinesis ISS
 biological_processGO:0044878 mitotic cytokinesis checkpoint ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031902 late endosome membrane IEA


Pathways (from Reactome)
Pathway description
Macroautophagy
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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