ENSDARG00000016255


Danio rerio

Features
Gene ID: ENSDARG00000016255
  
Biological name :chmp4ba
  
Synonyms : charged multivesicular body protein 4Ba / chmp4ba
  
Possible biological names infered from orthology : charged multivesicular body protein 4B / CHMP4B / Q9D8B3 / Q9H444
  
Species: Danio rerio
  
Chr. number: 6
Strand: 1
Band:
Gene start: 49901465
Gene end: 49920320
  
Corresponding Affymetrix probe sets: Dr.893.1.S1_at (Zebrafish Array)   NM_200195_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000017897
NCBI entrez gene - 393164     See in Manteia.
RefSeq - NM_200195
RefSeq Peptide - NP_956489
swissprot - F1R9G6
ZFIN ID - ZDB-GENE-040426-906
Ensembl - ENSDARG00000016255
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHMP4BENSGALG00000002095Gallus gallus
 CHMP4BENSG00000101421Homo sapiens
 Chmp4bENSMUSG00000038467Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6IQ73 / chmp4bb / charged multivesicular body protein 4Bb / Q9H444* / CHMP4B* / Q9D8B3* / charged multivesicular body protein 4B*ENSDARG0000000732382
chmp4c / charged multivesicular body protein 4C / Q96CF2* / Q9D7F7*ENSDARG0000000741868


Protein motifs (from Interpro)
Interpro ID Name
 IPR005024  Snf7 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007034 vacuolar transport IEA


Pathways (from Reactome)
Pathway description
Macroautophagy
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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