ENSDARG00000007344


Danio rerio

Features
Gene ID: ENSDARG00000007344
  
Biological name :tcap
  
Synonyms : tcap / titin-cap (telethonin)
  
Possible biological names infered from orthology : O15273 / O70548 / titin-cap
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 21240594
Gene end: 21242460
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000027408
NCBI entrez gene - 556258     See in Manteia.
RefSeq - NM_001305571
RefSeq Peptide - NP_001292500
swissprot - E9QCX4
ZFIN ID - ZDB-GENE-070501-5
Ensembl - ENSDARG00000007344
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TCAPENSG00000173991Homo sapiens
 TcapENSMUSG00000007877Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FO704821.1ENSDARG0000011325720


Protein motifs (from Interpro)
Interpro ID Name
 IPR015667  Telethonin
 IPR023111  Titin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0033292 T-tubule organization IMP
 biological_processGO:0055001 muscle cell development IMP
 biological_processGO:0060047 heart contraction IMP
 cellular_componentGO:0030018 Z disc IDA


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000054 pericardium pericardium edematous , abnormal
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 ZFA:0000114 heart heart edematous , abnormal
heart decreased contractility , abnormal
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 ZFA:0000154 sinus venosus sinus venosus increased accumulation blood , abnormal
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 ZFA:0000610 vertical myoseptum vertical myoseptum malformed , abnormal
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 ZFA:0001056 myotome myotome T-tubule mislocalised , abnormal
myotome T-tubule decreased amount , abnormal
myotome malformed , abnormal
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 ZFA:0001094 whole organism whole organism decreased length , abnormal
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 ZFA:0001117 post-vent region post-vent region curved , abnormal
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 ZFA:0005145 muscle muscle disorganized , abnormal
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 ZFA:0009115 skeletal muscle cell skeletal muscle cell myofibril disorganized , abnormal
skeletal muscle cell myofibril disoriented , abnormal
skeletal muscle cell myofibril undulate , abnormal
skeletal muscle cell myofibril increased variability of size , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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