ENSDARG00000007494


Danio rerio

Features
Gene ID: ENSDARG00000007494
  
Biological name :st3gal8
  
Synonyms : ST3 beta-galactoside alpha-2,3-sialyltransferase 8 / st3gal8
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 26568492
Gene end: 26590429
  
Corresponding Affymetrix probe sets: Dr.7657.1.A1_at (Zebrafish Array)   NM_001004017_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000008800
Ensembl peptide - ENSDARP00000104572
Ensembl peptide - ENSDARP00000127954
Ensembl peptide - ENSDARP00000145002
NCBI entrez gene - 445567     See in Manteia.
RefSeq - NM_001004017
RefSeq - XM_009306027
RefSeq Peptide - NP_001004017
swissprot - F1R1A7
swissprot - F1R1I9
ZFIN ID - ZDB-GENE-050417-286
Ensembl - ENSDARG00000007494
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000042462Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
st3gal2 / ST3 beta-galactoside alpha-2,3-sialyltransferase 2 / Q16842*ENSDARG0000011289845
st3gal1l / st3gal1l2 / ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like / Q11201* / P54751* / ST3GAL1* / ST3 beta-galactoside alpha-2,3-sialyltransferase 1*ENSDARG0000007931038
st3gal1 / ST3 beta-galactoside alpha-2,3-sialyltransferase 1 / P54751* / Q11201*ENSDARG0000007965437
st3gal1l3 / ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like 3 / P54751* / Q11201* / ST3GAL1* / ST3 beta-galactoside alpha-2,3-sialyltransferase 1*ENSDARG0000009928936
st3gal7 / ST3 beta-galactoside alpha-2,3-sialyltransferase 7ENSDARG0000003906422
st3gal4 / ST3 beta-galactoside alpha-2,3-sialyltransferase 4 / Q11206*ENSDARG0000004100621
st6galnac1.1 / ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 / Q9NSC7* / Q9QZ39* / ST6GALNAC1* / ST6 N-ac...ENSDARG0000004381421
CU459056.1 / Q9UJ37* / ST6GALNAC2* / ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2*ENSDARG0000011264420
st3gal3a / ST3 beta-galactoside alpha-2,3-sialyltransferase 3a / P97325* / Q11203* / ST3GAL3* / ST3 beta-galactoside alpha-2,3-sialyltransferase 3* / CMP-N-acetylneuraminate-beta-1,4-galact...ENSDARG0000001537420
st3gal5 / ST3 beta-galactoside alpha-2,3-sialyltransferase 5 / O88829* / Q9UNP4* / Lactosylceramide alpha-2,3-sialyltransferase *ENSDARG0000003755620
st3gal3b / ST3 beta-galactoside alpha-2,3-sialyltransferase 3b / P97325* / Q11203* / ST3GAL3* / ST3 beta-galactoside alpha-2,3-sialyltransferase 3* / CMP-N-acetylneuraminate-beta-1,4-galact...ENSDARG0000001525219
st6galnac1.2 / ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 / Q9NSC7* / Q9QZ39* / ST6GALNAC1* / ST6 N-ac...ENSDARG0000004381618


Protein motifs (from Interpro)
Interpro ID Name
 IPR001675  Glycosyl transferase family 29
 IPR012163  Sialyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0009311 oligosaccharide metabolic process IBA
 biological_processGO:0018279 protein N-linked glycosylation via asparagine IBA
 biological_processGO:0097503 sialylation IEA
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003836 beta-galactoside (CMP) alpha-2,3-sialyltransferase activity IBA
 molecular_functionGO:0008373 sialyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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