ENSDARG00000043816


Danio rerio

Features
Gene ID: ENSDARG00000043816
  
Biological name :st6galnac1.2
  
Synonyms : ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 / st6galnac1.2
  
Possible biological names infered from orthology : Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1 / Q9NSC7 / Q9QZ39 / ST6GALNAC1 / ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 20691310
Gene end: 20700872
  
Corresponding Affymetrix probe sets: Dr.13728.1.A1_at (Zebrafish Array)   Dr.14505.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000064334
Ensembl peptide - ENSDARP00000127141
Ensembl peptide - ENSDARP00000127333
NCBI entrez gene - 799868     See in Manteia.
RefSeq - NM_001082934
RefSeq Peptide - NP_001076403
swissprot - Q5P991
swissprot - U3JA76
swissprot - U3JAR4
ZFIN ID - ZDB-GENE-041014-161
Ensembl - ENSDARG00000043816
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q92183ENSGALG00000001862Gallus gallus
 Q9NSC7ENSG00000070526Homo sapiens
 Q9QZ39ENSMUSG00000009588Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
st6galnac1.1 / ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 / Q9NSC7* / Q9QZ39* / ST6GALNAC1* / ST6 N-ac...ENSDARG0000004381446
CU459056.1 / Q9UJ37* / ST6GALNAC2* / ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2*ENSDARG0000011264429
st3gal1l3 / ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like 3 / P54751* / Q11201* / ST3GAL1* / ST3 beta-galactoside alpha-2,3-sialyltransferase 1*ENSDARG0000009928918
st3gal1 / ST3 beta-galactoside alpha-2,3-sialyltransferase 1 / P54751* / Q11201*ENSDARG0000007965417
st3gal3a / ST3 beta-galactoside alpha-2,3-sialyltransferase 3a / P97325* / Q11203* / ST3GAL3* / ST3 beta-galactoside alpha-2,3-sialyltransferase 3* / CMP-N-acetylneuraminate-beta-1,4-galact...ENSDARG0000001537417
st3gal2 / ST3 beta-galactoside alpha-2,3-sialyltransferase 2 / Q16842*ENSDARG0000011289817
st3gal1l / st3gal1l2 / ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like / Q11201* / P54751* / ST3GAL1* / ST3 beta-galactoside alpha-2,3-sialyltransferase 1*ENSDARG0000007931017
st3gal3b / ST3 beta-galactoside alpha-2,3-sialyltransferase 3b / P97325* / Q11203* / ST3GAL3* / ST3 beta-galactoside alpha-2,3-sialyltransferase 3* / CMP-N-acetylneuraminate-beta-1,4-galact...ENSDARG0000001525216
st3gal4 / ST3 beta-galactoside alpha-2,3-sialyltransferase 4 / Q11206*ENSDARG0000004100616
st3gal8 / ST3 beta-galactoside alpha-2,3-sialyltransferase 8ENSDARG0000000749415
st3gal5 / ST3 beta-galactoside alpha-2,3-sialyltransferase 5 / O88829* / Q9UNP4* / Lactosylceramide alpha-2,3-sialyltransferase *ENSDARG0000003755615
st3gal7 / ST3 beta-galactoside alpha-2,3-sialyltransferase 7ENSDARG0000003906414


Protein motifs (from Interpro)
Interpro ID Name
 IPR001675  Glycosyl transferase family 29


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001574 ganglioside biosynthetic process IBA
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0009311 oligosaccharide metabolic process IBA
 biological_processGO:0018279 protein N-linked glycosylation via asparagine IBA
 biological_processGO:0097503 sialylation IEA
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0001665 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IBA
 molecular_functionGO:0008373 sialyltransferase activity IEA


Pathways (from Reactome)
Pathway description
Sialic acid metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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