ENSDARG00000037556


Danio rerio

Features
Gene ID: ENSDARG00000037556
  
Biological name :st3gal5
  
Synonyms : ST3 beta-galactoside alpha-2,3-sialyltransferase 5 / st3gal5
  
Possible biological names infered from orthology : Lactosylceramide alpha-2,3-sialyltransferase / O88829 / Q9UNP4
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 9481443
Gene end: 9499474
  
Corresponding Affymetrix probe sets: Dr.5279.1.A1_at (Zebrafish Array)   NM_199516_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000118337
Ensembl peptide - ENSDARP00000133508
Ensembl peptide - ENSDARP00000119698
Ensembl peptide - ENSDARP00000054689
NCBI entrez gene - 394230     See in Manteia.
RefSeq - NM_199516
RefSeq Peptide - NP_955810
swissprot - E9QJC9
swissprot - E9QDZ4
swissprot - F1RCA6
ZFIN ID - ZDB-GENE-060322-1
Ensembl - ENSDARG00000037556
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ST3GAL5ENSGALG00000033260Gallus gallus
 Q9UNP4ENSG00000115525Homo sapiens
 O88829ENSMUSG00000056091Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
st3gal7 / ST3 beta-galactoside alpha-2,3-sialyltransferase 7ENSDARG0000003906432
st3gal3a / ST3 beta-galactoside alpha-2,3-sialyltransferase 3a / P97325* / Q11203* / ST3GAL3* / ST3 beta-galactoside alpha-2,3-sialyltransferase 3* / CMP-N-acetylneuraminate-beta-1,4-galact...ENSDARG0000001537431
st3gal3b / ST3 beta-galactoside alpha-2,3-sialyltransferase 3b / P97325* / Q11203* / ST3GAL3* / ST3 beta-galactoside alpha-2,3-sialyltransferase 3* / CMP-N-acetylneuraminate-beta-1,4-galact...ENSDARG0000001525231
st3gal4 / ST3 beta-galactoside alpha-2,3-sialyltransferase 4 / Q11206*ENSDARG0000004100625
st3gal1l3 / ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like 3 / P54751* / Q11201* / ST3GAL1* / ST3 beta-galactoside alpha-2,3-sialyltransferase 1*ENSDARG0000009928919
st6galnac1.1 / ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 1 / Q9NSC7* / Q9QZ39* / ST6GALNAC1* / ST6 N-ac...ENSDARG0000004381419
st3gal1l / st3gal1l2 / ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like / Q11201* / P54751* / ST3GAL1* / ST3 beta-galactoside alpha-2,3-sialyltransferase 1*ENSDARG0000007931019
st3gal8 / ST3 beta-galactoside alpha-2,3-sialyltransferase 8ENSDARG0000000749419
st3gal1 / ST3 beta-galactoside alpha-2,3-sialyltransferase 1 / P54751* / Q11201*ENSDARG0000007965418
st3gal2 / ST3 beta-galactoside alpha-2,3-sialyltransferase 2 / Q16842*ENSDARG0000011289818
CU459056.1 / Q9UJ37* / ST6GALNAC2* / ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2*ENSDARG0000011264418
st6galnac1.2 / ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 / Q9NSC7* / Q9QZ39* / ST6GALNAC1* / ST6 N-ac...ENSDARG0000004381618


Protein motifs (from Interpro)
Interpro ID Name
 IPR001675  Glycosyl transferase family 29
 IPR012163  Sialyltransferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006688 glycosphingolipid biosynthetic process IMP
 biological_processGO:0009311 oligosaccharide metabolic process IBA
 biological_processGO:0018279 protein N-linked glycosylation via asparagine IBA
 biological_processGO:0097503 sialylation IEA
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008373 sialyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0047291 lactosylceramide alpha-2,3-sialyltransferase activity ISS


Pathways (from Reactome)
Pathway description
Sialic acid metabolism


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000029 hindbrain hindbrain cell death increased occurrence , abnormal
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 ZFA:0000128 midbrain midbrain cell death increased occurrence , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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