ENSDARG00000008593


Danio rerio

Features
Gene ID: ENSDARG00000008593
  
Biological name :nbas
  
Synonyms : nbas / neuroblastoma amplified sequence / Q5TYW4
  
Possible biological names infered from orthology : A2RRP1
  
Species: Danio rerio
  
Chr. number: 20
Strand: -1
Band:
Gene start: 32838467
Gene end: 33174899
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000047833
Ensembl peptide - ENSDARP00000116619
NCBI entrez gene - 556592     See in Manteia.
RefSeq - NM_001044807
RefSeq Peptide - NP_001038272
swissprot - Q5RH19
swissprot - Q5TYW4
ZFIN ID - ZDB-GENE-041014-367
Ensembl - ENSDARG00000008593
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NBASENSGALG00000042614Gallus gallus
 NBASENSG00000151779Homo sapiens
 NbasENSMUSG00000020576Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR013244  Sec39 domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR029145  Neuroblastoma-amplified sequence, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IMP
 biological_processGO:0000956 nuclear-transcribed mRNA catabolic process IMP
 biological_processGO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0043009 chordate embryonic development IMP
 biological_processGO:2000623 negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IMP
 cellular_componentGO:0005783 endoplasmic reticulum IEA


Pathways (from Reactome)
Pathway description
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000008 brain brain necrotic , abnormal
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 ZFA:0000155 somite somite malformed , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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