ENSMUSG00000020576


Mus musculus

Features
Gene ID: ENSMUSG00000020576
  
Biological name :Nbas
  
Synonyms : Nbas / neuroblastoma amplified sequence
  
Possible biological names infered from orthology : A2RRP1
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: A1.1
Gene start: 13269133
Gene end: 13583811
  
Corresponding Affymetrix probe sets: 10394611 (MoGene1.0st)   10394625 (MoGene1.0st)   10394627 (MoGene1.0st)   1430587_at (Mouse Genome 430 2.0 Array)   1436143_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000036082
NCBI entrez gene - 71169     See in Manteia.
MGI - MGI:1918419
RefSeq - XM_011243895
RefSeq - NM_027706
RefSeq - XM_006515217
RefSeq - XM_006515218
RefSeq - XM_006515215
RefSeq - XM_006515216
RefSeq Peptide - NP_081982
swissprot - E9Q411
Ensembl - ENSMUSG00000020576
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nbasENSDARG00000008593Danio rerio
 NBASENSGALG00000042614Gallus gallus
 NBASENSG00000151779Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011044  Quinoprotein amine dehydrogenase, beta chain-like
 IPR013244  Sec39 domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR029145  Neuroblastoma-amplified sequence, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000956 nuclear-transcribed mRNA catabolic process IEA
 biological_processGO:0006890 retrograde vesicle-mediated transport, Golgi to ER ISO
 biological_processGO:2000623 negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0070939 Dsl1/NZR complex IEA
 molecular_functionGO:0000149 SNARE binding IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
COPI-dependent Golgi-to-ER retrograde traffic


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000024191 Bnip1 / Q6QD59 / Vesicle transport protein SEC20 / Q12981* / BCL2 interacting protein 1*  / reaction
 ENSMUSG00000002395 Use1 / Q9CQ56 / unconventional SNARE in the ER 1 homolog (S. cerevisiae) / Q9NZ43* / unconventional SNARE in the ER 1*  / reaction
 ENSMUSG00000029125 Stx18 / Q8VDS8 / Syntaxin-18 / Q9P2W9*  / reaction
 ENSMUSG00000032264 Zw10 / O54692 / zw10 kinetochore protein / O43264*  / complex
 ENSMUSG00000028999 Rint1 / Q8BZ36 / RAD50 interactor 1 / Q6NUQ1*  / complex






 

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