ENSDARG00000009106


Danio rerio

Features
Gene ID: ENSDARG00000009106
  
Biological name :serinc1
  
Synonyms : serinc1 / serine incorporator 1
  
Possible biological names infered from orthology : Q9NRX5 / Q9QZI8
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 40457599
Gene end: 40472519
  
Corresponding Affymetrix probe sets: Dr.7135.1.S1_at (Zebrafish Array)   NM_199727_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000027703
NCBI entrez gene - 325690     See in Manteia.
RefSeq - NM_199727
RefSeq Peptide - NP_956021
swissprot - Q7SZW7
ZFIN ID - ZDB-GENE-030131-4415
Ensembl - ENSDARG00000009106
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SERINC1ENSGALG00000014868Gallus gallus
 Q9NRX5ENSG00000111897Homo sapiens
 Q9QZI8ENSMUSG00000019877Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
serinc2 / serine incorporator 2 / Q8K0E7* / Q96SA4*ENSDARG0000005653264
serinc2l / serine incorporator 2, like / Q8K0E7* / Q96SA4* / SERINC2* / serine incorporator 2*ENSDARG0000005342563
serinc4 / serine incorporator 4 / A6NH21* / Q5XK03*ENSDARG0000004481538
Q803X0 / serinc5 / serine incorporator 5 / Q86VE9* / Q8BHJ6*ENSDARG0000000815338
si:ch73-267c23.10 / Q13530* / SERINC3* / serine incorporator 3*ENSDARG0000008613335
si:ch73-267c23.10 / Q13530* / SERINC3* / serine incorporator 3*ENSDARG0000011166920


Protein motifs (from Interpro)
Interpro ID Name
 IPR005016  Serine incorporator/TMS membrane protein
 IPR029552  Serine incorporator 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006658 phosphatidylserine metabolic process IEA
 biological_processGO:0006665 sphingolipid metabolic process IEA
 biological_processGO:0015825 L-serine transport IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0015194 L-serine transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
Serine biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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