ENSDARG00000009886


Danio rerio

Features
Gene ID: ENSDARG00000009886
  
Biological name :rnf114
  
Synonyms : ring finger protein 114 / rnf114
  
Possible biological names infered from orthology : E3 ubiquitin-protein ligase RNF114 / Q9ET26 / Q9Y508
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 3503596
Gene end: 3511630
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000015024
NCBI entrez gene - 414843     See in Manteia.
RefSeq - NM_001001828
RefSeq Peptide - NP_001001828
swissprot - Q6J0N1
ZFIN ID - ZDB-GENE-040813-1
Ensembl - ENSDARG00000009886
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNF114ENSGALG00000008021Gallus gallus
 Q9Y508ENSG00000124226Homo sapiens
 Q9ET26ENSMUSG00000006418Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rnf166 / ring finger protein 166 / Q96A37*ENSDARG0000008953843


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR008598  Drought induced 19 protein type, zinc-binding domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif
 IPR034734  Zinc finger C2HC RNF-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0005622 intracellular IBA
 molecular_functionGO:0031624 ubiquitin conjugating enzyme binding IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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