ENSMUSG00000006418


Mus musculus

Features
Gene ID: ENSMUSG00000006418
  
Biological name :Rnf114
  
Synonyms : E3 ubiquitin-protein ligase RNF114 / Q9ET26 / Rnf114
  
Possible biological names infered from orthology : Q9Y508 / ring finger protein 114
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: H3
Gene start: 167492645
Gene end: 167516173
  
Corresponding Affymetrix probe sets: 10478875 (MoGene1.0st)   1422959_s_at (Mouse Genome 430 2.0 Array)   1427874_at (Mouse Genome 430 2.0 Array)   1437949_x_at (Mouse Genome 430 2.0 Array)   1445585_at (Mouse Genome 430 2.0 Array)   1455975_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000077197
Ensembl peptide - ENSMUSP00000104837
Ensembl peptide - ENSMUSP00000138430
NCBI entrez gene - 81018     See in Manteia.
MGI - MGI:1933159
RefSeq - XM_006500439
RefSeq - NM_030743
RefSeq Peptide - NP_109668
swissprot - Q9ET26
swissprot - S4R1Z0
Ensembl - ENSMUSG00000006418
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf114ENSDARG00000009886Danio rerio
 RNF114ENSGALG00000008021Gallus gallus
 Q9Y508ENSG00000124226Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q3U9F6 / Rnf166 / ring finger protein 166 / Q96A37*ENSMUSG0000001447044
Q9CQE0 / Rnf138 / E3 ubiquitin-protein ligase RNF138 / Q8WVD3* / ring finger protein 138*ENSMUSG0000002431730
Rnf138rt1 / ring finger protein 138, retrogene 1ENSMUSG0000008369529
Q9D9R0 / Rnf125 / E3 ubiquitin-protein ligase RNF125 / Q96EQ8* / ring finger protein 125*ENSMUSG0000003310717


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR008598  Drought induced 19 protein type, zinc-binding domain
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif
 IPR034734  Zinc finger C2HC RNF-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IBA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0005886 plasma membrane ISO
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity ISO
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0031624 ubiquitin conjugating enzyme binding IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr