ENSDARG00000010078


Danio rerio

Features
Gene ID: ENSDARG00000010078
  
Biological name :nup133
  
Synonyms : nucleoporin 133 / nup133
  
Possible biological names infered from orthology : Nuclear pore complex protein Nup133 / Q8R0G9 / Q8WUM0
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 53919110
Gene end: 53941906
  
Corresponding Affymetrix probe sets: Dr.20194.1.S1_at (Zebrafish Array)   NM_213531_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000023984
NCBI entrez gene - 406852     See in Manteia.
RefSeq - NM_213531
RefSeq Peptide - NP_998696
swissprot - F1QNV4
ZFIN ID - ZDB-GENE-040426-2941
Ensembl - ENSDARG00000010078
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NUP133ENSGALG00000011091Gallus gallus
 NUP133ENSG00000069248Homo sapiens
 Nup133ENSMUSG00000039509Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007187  Nucleoporin, Nup133/Nup155-like, C-terminal
 IPR014908  Nucleoporin, Nup133/Nup155-like, N-terminal
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000972 transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery IBA
 biological_processGO:0006325 chromatin organization IBA
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 biological_processGO:0006405 RNA export from nucleus IBA
 biological_processGO:0006606 protein import into nucleus IBA
 biological_processGO:0031081 nuclear pore distribution IBA
 cellular_componentGO:0000777 condensed chromosome kinetochore IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031080 nuclear pore outer ring IBA
 molecular_functionGO:0017056 structural constituent of nuclear pore IBA


Pathways (from Reactome)
Pathway description
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Transport of Mature mRNA derived from an Intron-Containing Transcript
Regulation of Glucokinase by Glucokinase Regulatory Protein
snRNP Assembly
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
SUMOylation of DNA damage response and repair proteins
SUMOylation of ubiquitinylation proteins
Nuclear Pore Complex (NPC) Disassembly
SUMOylation of SUMOylation proteins
SUMOylation of chromatin organization proteins
SUMOylation of RNA binding proteins
Transcriptional regulation by small RNAs
RHO GTPases Activate Formins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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